Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq830178 84.2 2e-14 seq63997 82.4 7e-14 >seq830178 Length=319 Score = 84.2 bits (92), Expect = 2e-14 Identities = 87/112 (78%), Gaps = 8/112 (7%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 || |||||||||||| || ||||||||||||| |||| || ||||||||||| |||| Sbjct 23 GGCGGATGCCTAGGCAGTCAGAGGCGAAGAAGGGCGTGCAAATCTGCGAAAAGCGACGGT 82 Query 68 GATTGGCACATACGAA--TTGAT---CCGTAGATATCCGAATGGGGCAACCC 114 || || ||| ||| |||| |||| |||| |||||||||| ||||| Sbjct 83 GA---GCTGATAGGAAGCGTGATTAGCCGTTGATACCCGAATGGGGAAACCC 131 >seq63997 Length=3562 Score = 82.4 bits (90), Expect = 7e-14 Identities = 86/112 (77%), Gaps = 7/112 (6%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 |||| |||||| ||| || |||||||||||||||||| ||| ||||||||||| ||| Sbjct 349 GGTGAATGCCTTGGCAGTCAGAGGCGAAGAAGGACGTGCTAATCTGCGAAAAGCGTCGG- 407 Query 68 GATTGGCACATACGAATTG----ATCCGTAGATATCCGAATGGGGCAACCCG 115 | || ||| ||| | | |||| ||||||||||||||| |||||| Sbjct 408 --TAAGCTGATATGAAGCGCAATAACCGTCGATATCCGAATGGGGAAACCCG 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472753247910