Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq63997 480 2e-133 seq759 244 3e-62 seq586055 188 2e-45 seq378453 154 4e-35 seq18414 154 4e-35 seq130941 132 1e-28 seq15325 127 5e-27 seq17577 120 8e-25 seq104254 95.1 3e-17 seq320072 89.7 1e-15 seq728539 86.0 2e-14 seq864983 84.2 5e-14 seq460139 84.2 5e-14 >seq63997 Length=3562 Score = 480 bits (532), Expect = 2e-133 Identities = 367/431 (85%), Gaps = 6/431 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||||| | ||||||||||||||||| | |||||||||||| Sbjct 2388 CGCGGGTATACTGCATCTTCACAGCAAATTCAATTTCACTGAGTCCCAGGTGGAGACAGC 2329 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2328 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2269 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||| Sbjct 2268 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAGTCTAGAGCTTTAAGTTT 2209 Query 181 GC--TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 | | || | || ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 2208 CCTTTGACTCTTTCGATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACTTCCAC 2149 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 2148 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGA 2089 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCG---GCGCACCTTCTCCCGAAG 355 | | | |||| |||| || ||||| | || | | ||| ||||||||||||| Sbjct 2088 CTAACGTCAGCTACAGGAGTAAATCCTT-TCACTTAATGTTAGCGTGCCTTCTCCCGAAG 2030 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||| | ||||||||||||||||| || | ||||||||||||||||| |||||||| Sbjct 2029 TTACGGCACTATTTTGCCTAGTTCCTTCACCTGGGTTCTCTCAAGCGCCTTAGTATTCTC 1970 Query 416 TACCCAACCAC 426 ||| |||||| Sbjct 1969 TACTTAACCAC 1959 >seq759 Length=12707 Score = 244 bits (270), Expect = 3e-62 Identities = 301/412 (73%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 5092 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 5033 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 5032 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 4973 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 4972 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 4919 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | || |||| |||||||||||| |||| || |||||| || || | | Sbjct 4918 TTCTCCTTCCGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 4859 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 4858 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 4799 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 4798 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 4754 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 4753 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 4702 >seq586055 Length=493 Score = 188 bits (208), Expect = 2e-45 Identities = 214/286 (75%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || |||||||||| | ||| | ||||||| || || Sbjct 358 TACTCCGCATCTTCACGGAGAATTCAATTTCATCGGGTCCATGTCGGAGACAACGGGGCA 299 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||| |||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 298 GTCGTTACACCACTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 239 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| |||||||||||| |||||||| || | ||||| || | | Sbjct 238 CAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTTCCATTCAAAGCTT---GTAACACTTC 182 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 || || || |||| |||||||| ||| |||| || ||||| || || | | Sbjct 181 TCCTTC---CGACTTTCCAGCACCGGGAAGGTGTCAGACTCTATATATCGTGTTACCACT 125 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 | ||| ||| |||||||||||||||||||||| | |||||||| Sbjct 124 TAGCAAAGTCTTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTAT 79 >seq378453 Length=853 Score = 154 bits (170), Expect = 4e-35 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| |||| || ||| ||| || Sbjct 600 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGATAGTGCCCATATCATT 659 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||| ||||||||||| |||||| |||||| |||||| |||| Sbjct 660 ACGCCTTTCGTGCGGGTCGGAAGTTACCCGACAAAGAATTTTGCTACCGTAGGACTGTTA 719 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165 | |||||||||||| || |||||||||||| || Sbjct 720 TAGTTACGGCCGCCATTCACCGGGGCTTCGGTC 752 >seq18414 Length=5984 Score = 154 bits (170), Expect = 4e-35 Identities = 205/282 (73%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73 ||||||||| | || ||||||||||| ||||| | |||||||||| || |||||| Sbjct 1606 CATCTTCACGGAGAATTCAATTTCACCGAGTCCATGTCGGAGACAGCGGGGCAGTCGTTA 1547 Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 133 | ||||| ||| || || ||||| ||||||||||||||||||||||||| |||| Sbjct 1546 CACCATTTGTGTTGG-CGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGATAGTTAG 1488 Query 134 TGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCA 193 ||||| ||| | ||||| ||||||||| || | ||||| |||| | | Sbjct 1487 AGTTACTGCCACTGTTTATCGGGGCTTCCATTCAAAGCTT--------ATAACACTTTTC 1436 Query 194 ATT--AACCTTCCGGCACCGGGCAGGCGTCACA-CCCTATACGTCCACTTTCGTGTTTGC 250 || || |||| | | | |||||| |||| | | |||||| || || | || || Sbjct 1435 CTTCCGACTTTCCAGTATCAGGCAGGTGTCAGATCTCTATACATCGTGTTACCACTTAGC 1376 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 ||||| |||||||||||||||||||||| | |||||||| Sbjct 1375 AGAGTCATGTGTTTTTAATAAACAGTCGCTACCCCCTGGTAT 1334 >seq130941 Length=2291 Score = 132 bits (146), Expect = 1e-28 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33 ATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGG 92 ||||||| | ||| | |||||||||| || ||||||| |||||||||||||||| Sbjct 1 ATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGC 60 Query 93 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||| |||||||||||||| |||||||||||| |||| |||| ||||||||||| Sbjct 61 TACTTATGCGACAAGGAATTTCACTACCTTAGGACAGTTAGAATTACCACCGCCGTTTAC 120 Query 153 CGGGGCTTCGATCAAGAGCTT 173 ||||||||| || | ||||| Sbjct 121 CGGGGCTTCCATTCAAAGCTT 141 >seq15325 Length=6360 Score = 127 bits (140), Expect = 5e-27 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73 ||| ||||||| || ||||||| ||||||| ||||||| ||| ||||||| Sbjct 2641 CATTTTCACAGACCGGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTTA 2582 Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 133 |||| ||||| ||| |||| |||| ||||||||||||||||||||||||| |||||| Sbjct 2581 CGCCTTTCGTATGGGTTGGAAATTACACGACAAGGAATTTCGCTACCTTAGGTTCGTTAT 2522 Query 134 TGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 |||||| ||||| | || ||||||||| ||| Sbjct 2521 AGTTACGACCGCCTTGCACTGGGGCTTCGGTCA 2489 >seq17577 Length=6077 Score = 120 bits (132), Expect = 8e-25 Identities = 194/275 (71%), Gaps = 13/275 (5%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||||||| || || ||||||| ||| || |||||| || |||| Sbjct 3724 CTGCATCTTCACATACATGTCTATTTCACCGAGCCTGTCTCCAAGACAGTGCTTAGATCG 3665 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||||||| ||||| | || ||||||||| |||||||||||| ||||||||||| | | Sbjct 3664 TTACGCCTTTCGTACTATTCAGAACTTACCTGACAAGGAATTTTTCTACCTTAGGATCAT 3605 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC--- 187 ||| ||||| ||| | || ||| ||||||| ||| | | | | || | ||| Sbjct 3604 TATAGTTACATCCGTCATTCACCTGGGCTTCTGTCATTGGATCCCC--TA--TCACCAGG 3549 Query 188 CCATCAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 |||||| || || || ||||| |||||||||||| |||| |||| | ||| | Sbjct 3548 TCATCAATTTCCTTGACTTTTTGGCACTGGGCAGGCGTCA-ACCCCATACATGGTCTTAC 3490 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTC 277 | ||| | || |||||||||| |||| |||| Sbjct 3489 GACTTTACGAAGACCTGTGTTTTTGGTAAATAGTC 3455 >seq104254 Length=2677 Score = 95.1 bits (104), Expect = 3e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 104 CAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA 163 |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| Sbjct 2677 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGACCGCCGTTCACCGGGGCTTCGG 2618 Query 164 TC 165 || Sbjct 2617 TC 2616 >seq320072 Length=1029 Score = 89.7 bits (98), Expect = 1e-15 Identities = 117/161 (73%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 17 CTTCACAGCGATTTCAATTTCACTGAGTC----TCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| || |||||||||| | ||| ||||| |||||| | ||||| Sbjct 586 CTTCACGAAGAATTCAATTTCATCGGGTCAATGTCGGG---AGACAGAAGGGAAGTCGTT 642 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||| || ||||| | ||||| |||| |||||||||||||| ||| Sbjct 643 ACACCATTCATGCAGGCCGCTACTTATGCAACAAGAAATTACGCTACCTTAGGACAATTA 702 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173 | ||||| | ||||||| || | ||||| || | ||||| Sbjct 703 TAGTTACTGTCGCCGTTAACTGATGCTTCCATTCAAAGCTT 743 >seq728539 Length=375 Score = 86.0 bits (94), Expect = 2e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| | | ||||||| ||||||||| | ||||||| Sbjct 358 GGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCT 299 Query 397 CAAGCGCCTTGGTATTCTCTAC 418 |||||||| | |||| |||||| Sbjct 298 CAAGCGCCCTAGTATACTCTAC 277 >seq864983 Length=304 Score = 84.2 bits (92), Expect = 5e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||||||||||||| | | ||||||| ||||||||| | ||||||||||||| Sbjct 207 CCTTCTCCCGAAGTTACGGGGTCATTTTGCCAAGTTCCTTCGACACGGTTCTCTCAAGCG 148 Query 403 CCTTGGTATTCTCTAC 418 || | |||| |||||| Sbjct 147 CCCTAGTATACTCTAC 132 >seq460139 Length=673 Score = 84.2 bits (92), Expect = 5e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||||||||||||| | | ||||||| ||||||||| | ||||||||||||| Sbjct 494 CCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCG 553 Query 403 CCTTGGTATTCTCTAC 418 || | |||| |||||| Sbjct 554 CCCTAGTATACTCTAC 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1249754005120