Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq759 268 2e-69 seq586055 241 3e-61 seq63997 224 2e-56 seq378453 168 1e-39 seq15325 168 1e-39 seq18414 165 2e-38 seq3703 156 9e-36 seq17577 149 1e-33 seq3085 122 2e-25 seq130941 114 3e-23 seq320072 93.3 9e-17 seq104254 89.7 1e-15 seq728539 82.4 2e-13 seq116727 82.4 2e-13 seq135947 80.6 6e-13 seq460139 78.8 2e-12 seq864983 77.0 7e-12 >seq759 Length=12707 Score = 268 bits (296), Expect = 2e-69 Identities = 285/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 5092 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 5033 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 5032 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 4973 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | |||| Sbjct 4972 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 4921 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| || ||||||||||||||||| ||||| ||||||||||| || | | Sbjct 4920 ACTTCTCCTTCCGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 4861 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 4860 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 4801 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 4800 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 4741 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 4740 CTTCGACATGGTTCTC 4725 >seq586055 Length=493 Score = 241 bits (266), Expect = 3e-61 Identities = 271/363 (75%), Gaps = 20/363 (6%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | |||||||| || ||| || |||||| | | Sbjct 358 TACTCCGCATCTTCACGGAGAATTCAATTTCATCGGGTCCATGTCGGAGACAACGGGGCA 299 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || |||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 298 GTCGTTACACCACTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 239 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||||||||||| |||| ||| | |||| Sbjct 238 CAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTTCCATTCAAAGCT--------TGTAAC 187 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| || ||||||||||||| ||| ||||| ||||| ||||| || | | Sbjct 186 ACTTCTCCTTCCGACTTTCCAGCACCGGGAAGGTGTCAGACTCTATATATCGTGTTACCA 127 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||| | | ||||||||| |||||||||||| ||| | | ||| || | | Sbjct 126 CTTAGCAAAGTCTTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 67 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 66 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 7 Query 349 CTT 351 ||| Sbjct 6 CTT 4 >seq63997 Length=3562 Score = 224 bits (248), Expect = 2e-56 Identities = 214/271 (79%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAATCG 64 |||||||||| | | | ||||||||| ||||| || ||||||| || ||| || Sbjct 2376 GCATCTTCACAGCAAATTCAATTTCACTGAGTCCCAGGTGGAGACAGCCTGGCCA--TCA 2319 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2318 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 2259 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT--CGATTGCTCTAACAG 182 |||||||||||||||||||||| ||||||| ||| | |||| | || || | || Sbjct 2258 TATAGTTACGGCCGCCGTTTACCGGGGCTTCAGTCTAGAGCTTTAAGTTTCCTTTGACTC 2199 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | | |||||||||| ||||||||||||||||| | ||||| || ||| || || Sbjct 2198 TTTCGATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACTTCCACTTTCGTGTTT 2139 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 ||| | |||||||||| |||||||| || Sbjct 2138 GCACAGTGCTGTGTTTTTAATAAACAGTTGC 2108 >seq378453 Length=853 Score = 168 bits (186), Expect = 1e-39 Identities = 126/148 (85%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | |||| |||||||| ||| || Sbjct 600 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGATAGTGCCCATATCATT 659 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||| ||||||||||| |||||| |||||| |||||| |||| Sbjct 660 ACGCCTTTCGTGCGGGTCGGAAGTTACCCGACAAAGAATTTTGCTACCGTAGGACTGTTA 719 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||||||||||| || || ||||||| Sbjct 720 TAGTTACGGCCGCCATTCACCGGGGCTT 747 >seq15325 Length=6360 Score = 168 bits (186), Expect = 1e-39 Identities = 172/223 (77%), Gaps = 11/223 (5%) Strand=Plus/Minus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 |||||||||||||| | ||||||||||||| ||||||||||||||||| |||| || Sbjct 2622 ATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTATGGGTTGG 2563 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 || |||| ||||||||||||||||||||||||| ||||||||||||| ||||| | || Sbjct 2562 AAATTACACGACAAGGAATTTCGCTACCTTAGGTTCGTTATAGTTACGACCGCCTTGCAC 2503 Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCT---AACAGATCCC-------CTTAACCTT 196 |||||||| | ||| || || || | | ||| || | ||||||||| Sbjct 2502 TGGGGCTT-CGGTCATTGGCTCCCCTGTCATGTCATCAGGTCACCAACTTTCTTAACCTT 2444 Query 197 CCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 ||| || |||||||| | ||| || |||||| ||||| |||| Sbjct 2443 CCAACATTGGGCAGGCATTAGCCCCCATACATGGTCTTACGAC 2401 >seq18414 Length=5984 Score = 165 bits (182), Expect = 2e-38 Identities = 200/270 (74%), Gaps = 12/270 (4%) Strand=Plus/Minus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| | || | ||||||||||||||| || ||||||| | | |||||| Sbjct 1606 CATCTTCACGGAGAATTCAATTTCACCGAGTCCATGTCGGAGACAGCGGGGCAGTCGTTA 1547 Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 | || || ||| || || ||||| ||||||||||||||||||||||||| |||| Sbjct 1546 CACCATTTGTGTTGG-CGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGATAGTTAG 1488 Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187 |||||| ||| | ||||| ||||||| |||| ||| | ||||| | | Sbjct 1487 AGTTACTGCCACTGTTTATCGGGGCTTCCATTCAAAGCT--------TATAACACTTTTC 1436 Query 188 CTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTC-CTATACATCGTCTTGCGACTTAGC 244 ||| || |||||| | | |||||| ||||| || ||||||||||| || | ||||||| Sbjct 1435 CTTCCGACTTTCCAGTATCAGGCAGGTGTCAGATCTCTATACATCGTGTTACCACTTAGC 1376 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 ||| | ||||||||| |||||||||||| Sbjct 1375 AGAGTCATGTGTTTTTAATAAACAGTCGCT 1346 >seq3703 Length=9340 Score = 156 bits (172), Expect = 9e-36 Identities = 137/169 (81%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| | || ||| |||||||||| ||||||||| ||||| |||||| || | Sbjct 2447 CCTTGACCTTCCGGTACTGGGAAGGCGTCAGCCCCTATACATGGTCTTACGACTTTGCGG 2506 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---TGTCATAGA 303 | |||| ||||||||||| |||||||| ||||| || ||||| || | | || Sbjct 2507 AGACCTATGTTTTTGGTACACAGTCGCCCTGGCCTGGTCACTGCGACCCCATTTGTGAG- 2565 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 2566 GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 2614 >seq17577 Length=6077 Score = 149 bits (164), Expect = 1e-33 Identities = 200/272 (74%), Gaps = 11/272 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| || | ||||||||||| || | ||||||||| | |||||| Sbjct 3722 GCATCTTCACATACATGTCTATTTCACCGAGCCTGTCTCCAAGACAGTGCTTAGATCGTT 3663 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||| | || ||||||||| |||||||||||| ||||||||||| | ||| Sbjct 3662 ACGCCTTTCGTACTATTCAGAACTTACCTGACAAGGAATTTTTCTACCTTAGGATCATTA 3603 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTG------CT-TCGATTGCTCTAA 179 ||||||| ||| | || || |||||| | ||| || || || | || | Sbjct 3602 TAGTTACATCCGTCATTCACCTGGGCTTCTG-TCATTGGATCCCCTATCACCAGGTC-AT 3545 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 || || |||| || || |||| |||||||||||| | || |||||| ||||| |||| Sbjct 3544 CA-ATTTCCTTGACTTTTTGGCACTGGGCAGGCGTCAAC-CCCATACATGGTCTTACGAC 3487 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 || | | |||||||||||||||||| |||| Sbjct 3486 TTTACGAAGACCTGTGTTTTTGGTAAATAGTC 3455 >seq3085 Length=9753 Score = 122 bits (134), Expect = 2e-25 Identities = 166/225 (74%), Gaps = 14/225 (6%) Strand=Plus/Plus Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 ||||||||||||||||||| || | || || || | ||| || ||| || | ||| | Sbjct 1 TATAGTTACGGCCGCCGTTCACCGAGGATTCGGT-CGCTGGCTCCCTTG-TC-ATCAGGT 57 Query 185 CC-------CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCG 237 | |||| ||||| | || |||||||| ||||| || |||||| ||||| || Sbjct 58 CATCAACTTCCTTGACCTTTCGACATTGGGCAGGCTTCAGCCCCCATACATGGTCTTACG 117 Query 238 ACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG- 296 |||| || || || ||||||||| ||||||||| | | |||| || ||||| || Sbjct 118 ACTTTGCGGAGACTTGTGTTTTTCATAAACAGTCTCCTAAGCCTGGTCGCTGCGACCCCC 177 Query 297 -TCAT-AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTT 339 | || ||| |||||||||||||||| ||||||||||| ||||| Sbjct 178 TTTATGAGA-AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTT 221 >seq130941 Length=2291 Score = 114 bits (126), Expect = 3e-23 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 ||||||||| ||| || ||||||| | | ||||||| || ||||||| ||||| Sbjct 1 ATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGC 60 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 ||||| |||||||||||||| |||||||||||| |||| | |||| ||||||||||| Sbjct 61 TACTTATGCGACAAGGAATTTCACTACCTTAGGACAGTTAGAATTACCACCGCCGTTTAC 120 Query 147 TGGGGCTTAAGTTCACTGCTT 167 ||||||| |||| |||| Sbjct 121 CGGGGCTTCCATTCAAAGCTT 141 >seq320072 Length=1029 Score = 93.3 bits (102), Expect = 9e-17 Identities = 116/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 11 CTTCACCGGGATTACAATTTCACCGAGTCTAT-TGTTGAGACAGTGCCCAAATCGTTACG 69 |||||| || | |||||||| || ||| || | ||||||| || ||||||| Sbjct 586 CTTCACGAAGAATTCAATTTCATCGGGTCAATGTCGGGAGACAGAAGGGAAGTCGTTACA 645 Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129 || ||| ||| || || ||||| | ||||| |||| |||||||||||||| |||||| Sbjct 646 CCATTCATGCAGGCCGCTACTTATGCAACAAGAAATTACGCTACCTTAGGACAATTATAG 705 Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT 167 |||| | ||||||| |||| |||| |||| |||| Sbjct 706 TTACTGTCGCCGTTAACTGATGCTTCCATTCAAAGCTT 743 >seq104254 Length=2677 Score = 89.7 bits (98), Expect = 1e-15 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 98 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct 2677 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGACCGCCGTTCACCGGGGCTT 2621 >seq728539 Length=375 Score = 82.4 bits (90), Expect = 2e-13 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct 359 AGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 300 >seq116727 Length=2484 Score = 82.4 bits (90), Expect = 2e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 2474 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 2415 Query 67 ACGCCTTTCGTGCGG 81 ||||||||||||||| Sbjct 2414 ACGCCTTTCGTGCGG 2400 >seq135947 Length=2229 Score = 80.6 bits (88), Expect = 6e-13 Identities = 82/105 (78%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 231 TCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC 290 |||| |||||| || || ||||||||||||||||||||||||| ||||| || ||| Sbjct 2229 TCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCAGGCCTGGTCATTGC 2170 Query 291 G---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGG 332 | ||| | || ||||||| |||||||| ||||||||||| Sbjct 2169 GACCCCCTTTGTGAG-GAGGCACCTCTTCTCCCGAAGTTACGGGG 2126 >seq460139 Length=673 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct 489 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 546 >seq864983 Length=304 Score = 77.0 bits (84), Expect = 7e-12 Identities = 84/112 (75%), Gaps = 10/112 (9%) Strand=Plus/Minus Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGA 303 ||||||||||| |||||||||||| ||| | | ||| || | | | ||| Sbjct 279 CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGA 220 Query 304 CAGG----CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 ||| ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 219 TAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCAAGTTCCTT 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1053092207360