Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04]
876,110 sequences; 1,133,657,130 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq759 268 2e-69
seq586055 241 3e-61
seq63997 224 2e-56
seq378453 168 1e-39
seq15325 168 1e-39
seq18414 165 2e-38
seq3703 156 9e-36
seq17577 149 1e-33
seq3085 122 2e-25
seq130941 114 3e-23
seq320072 93.3 9e-17
seq104254 89.7 1e-15
seq728539 82.4 2e-13
seq116727 82.4 2e-13
seq135947 80.6 6e-13
seq460139 78.8 2e-12
seq864983 77.0 7e-12
>seq759
Length=12707
Score = 268 bits (296), Expect = 2e-69
Identities = 285/376 (76%), Gaps = 20/376 (5%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 5092 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 5033
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 5032 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 4973
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| ||||||| |||| ||| | ||||
Sbjct 4972 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 4921
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| || ||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 4920 ACTTCTCCTTCCGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 4861
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 4860 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 4801
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 4800 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 4741
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 4740 CTTCGACATGGTTCTC 4725
>seq586055
Length=493
Score = 241 bits (266), Expect = 3e-61
Identities = 271/363 (75%), Gaps = 20/363 (6%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | |||||||| || ||| || |||||| | |
Sbjct 358 TACTCCGCATCTTCACGGAGAATTCAATTTCATCGGGTCCATGTCGGAGACAACGGGGCA 299
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || |||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 298 GTCGTTACACCACTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 239
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||||||||||| |||| ||| | ||||
Sbjct 238 CAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTTCCATTCAAAGCT--------TGTAAC 187
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| || ||||||||||||| ||| ||||| ||||| ||||| || | |
Sbjct 186 ACTTCTCCTTCCGACTTTCCAGCACCGGGAAGGTGTCAGACTCTATATATCGTGTTACCA 127
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||| | | ||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 126 CTTAGCAAAGTCTTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 67
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 66 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 7
Query 349 CTT 351
|||
Sbjct 6 CTT 4
>seq63997
Length=3562
Score = 224 bits (248), Expect = 2e-56
Identities = 214/271 (79%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAATCG 64
|||||||||| | | | ||||||||| ||||| || ||||||| || ||| ||
Sbjct 2376 GCATCTTCACAGCAAATTCAATTTCACTGAGTCCCAGGTGGAGACAGCCTGGCCA--TCA 2319
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2318 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 2259
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT--CGATTGCTCTAACAG 182
|||||||||||||||||||||| ||||||| ||| | |||| | || || | ||
Sbjct 2258 TATAGTTACGGCCGCCGTTTACCGGGGCTTCAGTCTAGAGCTTTAAGTTTCCTTTGACTC 2199
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| | |||||||||| ||||||||||||||||| | ||||| || ||| || ||
Sbjct 2198 TTTCGATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACTTCCACTTTCGTGTTT 2139
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
||| | |||||||||| |||||||| ||
Sbjct 2138 GCACAGTGCTGTGTTTTTAATAAACAGTTGC 2108
>seq378453
Length=853
Score = 168 bits (186), Expect = 1e-39
Identities = 126/148 (85%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | |||||||||||||| | |||| |||||||| ||| ||
Sbjct 600 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGATAGTGCCCATATCATT 659
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|||||||||||||||||||||| ||||||||||| |||||| |||||| |||||| ||||
Sbjct 660 ACGCCTTTCGTGCGGGTCGGAAGTTACCCGACAAAGAATTTTGCTACCGTAGGACTGTTA 719
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||||||||||| || || |||||||
Sbjct 720 TAGTTACGGCCGCCATTCACCGGGGCTT 747
>seq15325
Length=6360
Score = 168 bits (186), Expect = 1e-39
Identities = 172/223 (77%), Gaps = 11/223 (5%)
Strand=Plus/Minus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
|||||||||||||| | ||||||||||||| ||||||||||||||||| |||| ||
Sbjct 2622 ATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTATGGGTTGG 2563
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|| |||| ||||||||||||||||||||||||| ||||||||||||| ||||| | ||
Sbjct 2562 AAATTACACGACAAGGAATTTCGCTACCTTAGGTTCGTTATAGTTACGACCGCCTTGCAC 2503
Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCT---AACAGATCCC-------CTTAACCTT 196
|||||||| | ||| || || || | | ||| || | |||||||||
Sbjct 2502 TGGGGCTT-CGGTCATTGGCTCCCCTGTCATGTCATCAGGTCACCAACTTTCTTAACCTT 2444
Query 197 CCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239
||| || |||||||| | ||| || |||||| ||||| ||||
Sbjct 2443 CCAACATTGGGCAGGCATTAGCCCCCATACATGGTCTTACGAC 2401
>seq18414
Length=5984
Score = 165 bits (182), Expect = 2e-38
Identities = 200/270 (74%), Gaps = 12/270 (4%)
Strand=Plus/Minus
Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67
||||||||| | || | ||||||||||||||| || ||||||| | | ||||||
Sbjct 1606 CATCTTCACGGAGAATTCAATTTCACCGAGTCCATGTCGGAGACAGCGGGGCAGTCGTTA 1547
Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127
| || || ||| || || ||||| ||||||||||||||||||||||||| ||||
Sbjct 1546 CACCATTTGTGTTGG-CGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGATAGTTAG 1488
Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187
|||||| ||| | ||||| ||||||| |||| ||| | ||||| | |
Sbjct 1487 AGTTACTGCCACTGTTTATCGGGGCTTCCATTCAAAGCT--------TATAACACTTTTC 1436
Query 188 CTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTC-CTATACATCGTCTTGCGACTTAGC 244
||| || |||||| | | |||||| ||||| || ||||||||||| || | |||||||
Sbjct 1435 CTTCCGACTTTCCAGTATCAGGCAGGTGTCAGATCTCTATACATCGTGTTACCACTTAGC 1376
Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCT 274
||| | ||||||||| ||||||||||||
Sbjct 1375 AGAGTCATGTGTTTTTAATAAACAGTCGCT 1346
>seq3703
Length=9340
Score = 156 bits (172), Expect = 9e-36
Identities = 137/169 (81%), Gaps = 4/169 (2%)
Strand=Plus/Plus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||| ||||||| | || ||| |||||||||| ||||||||| ||||| |||||| || |
Sbjct 2447 CCTTGACCTTCCGGTACTGGGAAGGCGTCAGCCCCTATACATGGTCTTACGACTTTGCGG 2506
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---TGTCATAGA 303
| |||| ||||||||||| |||||||| ||||| || ||||| || | | ||
Sbjct 2507 AGACCTATGTTTTTGGTACACAGTCGCCCTGGCCTGGTCACTGCGACCCCATTTGTGAG- 2565
Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 2566 GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 2614
>seq17577
Length=6077
Score = 149 bits (164), Expect = 1e-33
Identities = 200/272 (74%), Gaps = 11/272 (4%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| || | ||||||||||| || | ||||||||| | ||||||
Sbjct 3722 GCATCTTCACATACATGTCTATTTCACCGAGCCTGTCTCCAAGACAGTGCTTAGATCGTT 3663
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||| | || ||||||||| |||||||||||| ||||||||||| | |||
Sbjct 3662 ACGCCTTTCGTACTATTCAGAACTTACCTGACAAGGAATTTTTCTACCTTAGGATCATTA 3603
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTG------CT-TCGATTGCTCTAA 179
||||||| ||| | || || |||||| | ||| || || || | || |
Sbjct 3602 TAGTTACATCCGTCATTCACCTGGGCTTCTG-TCATTGGATCCCCTATCACCAGGTC-AT 3545
Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239
|| || |||| || || |||| |||||||||||| | || |||||| ||||| ||||
Sbjct 3544 CA-ATTTCCTTGACTTTTTGGCACTGGGCAGGCGTCAAC-CCCATACATGGTCTTACGAC 3487
Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271
|| | | |||||||||||||||||| ||||
Sbjct 3486 TTTACGAAGACCTGTGTTTTTGGTAAATAGTC 3455
>seq3085
Length=9753
Score = 122 bits (134), Expect = 2e-25
Identities = 166/225 (74%), Gaps = 14/225 (6%)
Strand=Plus/Plus
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184
||||||||||||||||||| || | || || || | ||| || ||| || | ||| |
Sbjct 1 TATAGTTACGGCCGCCGTTCACCGAGGATTCGGT-CGCTGGCTCCCTTG-TC-ATCAGGT 57
Query 185 CC-------CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCG 237
| |||| ||||| | || |||||||| ||||| || |||||| ||||| ||
Sbjct 58 CATCAACTTCCTTGACCTTTCGACATTGGGCAGGCTTCAGCCCCCATACATGGTCTTACG 117
Query 238 ACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG- 296
|||| || || || ||||||||| ||||||||| | | |||| || ||||| ||
Sbjct 118 ACTTTGCGGAGACTTGTGTTTTTCATAAACAGTCTCCTAAGCCTGGTCGCTGCGACCCCC 177
Query 297 -TCAT-AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTT 339
| || ||| |||||||||||||||| ||||||||||| |||||
Sbjct 178 TTTATGAGA-AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTT 221
>seq130941
Length=2291
Score = 114 bits (126), Expect = 3e-23
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
||||||||| ||| || ||||||| | | ||||||| || ||||||| |||||
Sbjct 1 ATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGC 60
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
||||| |||||||||||||| |||||||||||| |||| | |||| |||||||||||
Sbjct 61 TACTTATGCGACAAGGAATTTCACTACCTTAGGACAGTTAGAATTACCACCGCCGTTTAC 120
Query 147 TGGGGCTTAAGTTCACTGCTT 167
||||||| |||| ||||
Sbjct 121 CGGGGCTTCCATTCAAAGCTT 141
>seq320072
Length=1029
Score = 93.3 bits (102), Expect = 9e-17
Identities = 116/158 (73%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 11 CTTCACCGGGATTACAATTTCACCGAGTCTAT-TGTTGAGACAGTGCCCAAATCGTTACG 69
|||||| || | |||||||| || ||| || | ||||||| || |||||||
Sbjct 586 CTTCACGAAGAATTCAATTTCATCGGGTCAATGTCGGGAGACAGAAGGGAAGTCGTTACA 645
Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129
|| ||| ||| || || ||||| | ||||| |||| |||||||||||||| ||||||
Sbjct 646 CCATTCATGCAGGCCGCTACTTATGCAACAAGAAATTACGCTACCTTAGGACAATTATAG 705
Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT 167
|||| | ||||||| |||| |||| |||| ||||
Sbjct 706 TTACTGTCGCCGTTAACTGATGCTTCCATTCAAAGCTT 743
>seq104254
Length=2677
Score = 89.7 bits (98), Expect = 1e-15
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 98 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154
||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 2677 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGACCGCCGTTCACCGGGGCTT 2621
>seq728539
Length=375
Score = 82.4 bits (90), Expect = 2e-13
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
|||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 359 AGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 300
>seq116727
Length=2484
Score = 82.4 bits (90), Expect = 2e-13
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | |||||||||||||| | ||||||||||||| ||||||
Sbjct 2474 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 2415
Query 67 ACGCCTTTCGTGCGG 81
|||||||||||||||
Sbjct 2414 ACGCCTTTCGTGCGG 2400
>seq135947
Length=2229
Score = 80.6 bits (88), Expect = 6e-13
Identities = 82/105 (78%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 231 TCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC 290
|||| |||||| || || ||||||||||||||||||||||||| ||||| || |||
Sbjct 2229 TCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCAGGCCTGGTCATTGC 2170
Query 291 G---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGG 332
| ||| | || ||||||| |||||||| |||||||||||
Sbjct 2169 GACCCCCTTTGTGAG-GAGGCACCTCTTCTCCCGAAGTTACGGGG 2126
>seq460139
Length=673
Score = 78.8 bits (86), Expect = 2e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
|||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 489 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 546
>seq864983
Length=304
Score = 77.0 bits (84), Expect = 7e-12
Identities = 84/112 (75%), Gaps = 10/112 (9%)
Strand=Plus/Minus
Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGA 303
||||||||||| |||||||||||| ||| | | ||| || | | | |||
Sbjct 279 CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGA 220
Query 304 CAGG----CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351
||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 219 TAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCAAGTTCCTT 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1053092207360
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