Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq64947 149 1e-33 >seq64947 Length=3535 Score = 149 bits (164), Expect = 1e-33 Identities = 195/270 (72%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 9 TGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGAGTCC 68 ||||| || || || || ||||| ||||||| ||||| || | || || | Sbjct 1741 TGTCCGAGAGCTTGCGTGACTGTGGGGCAAAATGGGAATTTTGCTTGCTTGGCGGATACT 1800 Query 69 GACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGTTACC 128 || || | | || ||||||||||||| ||||| || || |||||| |||| ||||| ||| Sbjct 1801 GATCCCACTATTCAAGTCGGAGCATGTGGTGTTGACCTCGGTGATCGGACTTTGGTCACC 1860 Query 129 GGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAAGGAT 188 || |||| ||| || || || || || || ||| ||| | || || || || | Sbjct 1861 GGATCGGCTTACCAGGGTGCACCGCAGACCTTTTTCCTAGCGGAGAAGAAGAACAACCAA 1920 Query 189 GGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTGCAA 248 ||||| |||||||||||| || | |||| ||| ||||| ||||| || ||||||||| Sbjct 1921 GGGCATAATAGTAAATTGGTTAAATTGGATGCTCCGGATGAGTTTTCCGGGTTTGTGCAA 1980 Query 249 TCTGGATGCTGTGTGGAGATCTGAAATTTT 278 || ||||||| ||| ||||| | | ||||| Sbjct 1981 TCGGGATGCTTTGTCGAGATATAATATTTT 2010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910353805760