Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq63997 147 2e-33 seq655545 78.8 6e-13 >seq63997 Length=3562 Score = 147 bits (162), Expect = 2e-33 Identities = 116/139 (83%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| Sbjct 2779 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTAAGACCTG 2720 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| ||| | | ||| || |||| | ||| |||| |||||||| Sbjct 2719 CTTTCGCACCTGCTCGCGTTATCACGCTCACAGTCAAACTGGCTTATGCCTTTGCACTAA 2660 Query 121 CACTACGATTTCCGACCGT 139 | ||||| ||||||||| Sbjct 2659 CCTCACGATGTCCGACCGT 2641 >seq655545 Length=428 Score = 78.8 bits (86), Expect = 6e-13 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 3 CCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCT 62 ||||||||||||||||||| ||||||||| || || |||||||||| | || || Sbjct 136 CCTTTTATCCGTTGAGCGACAGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACT 77 Query 63 TTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCC 110 |||| |||||| | || | ||| |||||||||| | ||| |||| Sbjct 76 TTCGTCCCTGCTCGACGGGTGGGTCTTGCAATCAAGCTCCCTTCTGCC 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 349108837000