Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq63997 340 6e-91 seq759 176 2e-41 seq609463 159 1e-36 seq623229 131 6e-28 seq616197 122 3e-25 seq561533 111 5e-22 seq136804 98.7 3e-18 seq809582 96.9 1e-17 seq213709 86.0 2e-14 seq233260 84.2 7e-14 seq174920 82.4 3e-13 seq354691 78.8 3e-12 >seq63997 Length=3562 Score = 340 bits (376), Expect = 6e-91 Identities = 350/454 (77%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 28 GGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGC 87 |||| |||||||||||| |||||||| ||| || |||| ||||||| ||||| || Sbjct 995 GGGTACAGACCCGAAACCCGGTGATCTAGCCACGGGCAGGTTGAAGGTTGGGTAAAACCA 1054 Query 88 CCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGA 147 ||||||| ||||||| ||| |||||||||||| || |||||| || ||| ||||||||| Sbjct 1055 ACTGGAGGACCGAACCGACTGATGTTGAAAAATCAGCGGATGACCTATGGCTAGGGGTGA 1114 Query 148 AAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCA 207 ||||| || ||||| ||| ||||||||||||| |||||| |||||||||||| ||||| Sbjct 1115 AAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCG 1174 Query 208 AGTA-TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAA 266 | | ||| | ||||||||||||||||||| |||||||||| ||| || ||||||||| Sbjct 1175 TGAACTCATCTTCGGGGGTAGAGCACTGTTTCGGCTAGGGGGCCATCCCGGCTTACCAAA 1234 Query 267 CCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 || |||||||||||||| | | | ||| | |||||| | ||||||||| Sbjct 1235 CCGATGCAAACTCCGAATACCGTAGAATGTTATCACGGGAGACACACAGCGGGTGCTAAC 1294 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 || ||| || ||| || || || ||| ||||||||| ||| || | | || ||| Sbjct 1295 GTTCGTTGTGGAAAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATAGTTAA 1354 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || | ||||| || || || | ||||| ||||||||||||| |||||||||| | Sbjct 1355 GTGGGA--AACGATGTGGGAAGGCATAAACAGCCAGGATGTTGGCTTAGAAGCAGCCA-T 1411 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||| |||||| |||||||| ||| || Sbjct 1412 CATTTAAAGAAAGCGTAATAGCTCACTGGTCAAG 1445 >seq759 Length=12707 Score = 176 bits (194), Expect = 2e-41 Identities = 322/461 (70%), Gaps = 28/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 3349 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 3408 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 3409 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 3468 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 3469 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 3526 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 3527 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 3586 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || |||||| Sbjct 3587 CCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGTG 3642 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 |||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 3643 CTAA--TCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 3700 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 3701 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 3756 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 3757 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 3796 >seq609463 Length=469 Score = 159 bits (176), Expect = 1e-36 Identities = 194/258 (75%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 153 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 212 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 213 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 272 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 273 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 330 Query 214 ACCAT---CGGGGGTAGAGCACTGTTAT-GGCTAGGGGG---TCATTGCGACTTACCAAA 266 | || | | ||||||||||| | || |||||||| | |||| || |||||||| Sbjct 331 TCGATGGGCCGAGGTAGAGCACT-TAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAAC 389 Query 267 CCATTGCAAACTCCGAAT 284 || | ||||||||||| Sbjct 390 CCCAAGGAAACTCCGAAT 407 >seq623229 Length=456 Score = 131 bits (144), Expect = 6e-28 Identities = 283/415 (68%), Gaps = 25/415 (6%) Strand=Plus/Plus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||||| ||| |||||| |||||||||| | || | ||||| |||||||| ||||| | Sbjct 2 TAACAGGCCTTGGAGGACCGAACCCACGTACGTGGCAAAATACGGGGATGACTTGTGGCT 61 Query 140 AGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTA 199 ||||||||||||| || ||| | ||| ||| ||||| || ||||| |||||| ||| Sbjct 62 AGGGGTGAAAGGCCAACCAAGATCGGATATAAATGGTTTTCCGCGAAATCTATTTCAGTA 121 Query 200 GTGCCTCAAGTATCACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATT 253 | || | | || | || | | ||||||||||| |||||||| | |||| Sbjct 122 GAGCGT--ATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATT 179 Query 254 GCGACTTACCAAACCATTGCAAACTCCGAAT----GC--GCATCAGTTTTACCGCGGGAG 307 || |||||||| || | |||||||| || || ||| || ||| || Sbjct 180 TCGCCTTACCAACCCCAAGGAAACTCCGGATATAGGCCTAGATCGTTTGTAC----AGAC 235 Query 308 TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAG 367 || ||||||||||| ||| ||||||| || | || || | |||||| Sbjct 236 AGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAG 295 Query 368 GCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGAT 425 | ||| || | || ||| || || |||| |||| || | |||| ||| || Sbjct 296 GTCCCTAAGCAATCACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACTAAGAG 351 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || |||||||||||||||| || ||| |||| |||||| |||||||| ||| || Sbjct 352 GTGGGCTTGGAAGCAGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 405 >seq616197 Length=463 Score = 122 bits (134), Expect = 3e-25 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| ||||||||||| | ||| | || |||||||||||||| ||| Sbjct 173 GTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACT 114 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| ||| || ||||||| ||||| ||||||||||| || | | ||| || Sbjct 113 GATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAG 54 Query 168 ATAGCTGGTTCTCTCCGAAA 187 |||||||||||| |||||| Sbjct 53 CTAGCTGGTTCTCCCCGAAA 34 >seq561533 Length=521 Score = 111 bits (122), Expect = 5e-22 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 22 GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTA 81 ||| ||| | | |||||||| | |||||||| ||||| ||||||||||| | ||| Sbjct 520 GTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTG 461 Query 82 ACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAG 141 | || |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||| Sbjct 460 AAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAG 401 Query 142 GGGTGAAAGGC 152 |||||||| || Sbjct 400 GGGTGAAATGC 390 >seq136804 Length=2219 Score = 98.7 bits (108), Expect = 3e-18 Identities = 128/175 (73%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 2188 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 2129 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| |||||| ||| ||| | | || || || | ||| ||||||| |||| Sbjct 2128 AGGCCCCTAAATGATCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCCAGGAG 2071 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||| || | |||||||||| | || ||||||||||||| |||||||| ||||| Sbjct 2070 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAG 2017 >seq809582 Length=329 Score = 96.9 bits (106), Expect = 1e-17 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| Sbjct 23 TGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 82 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | | ||| || |||||||||||| |||||| Sbjct 83 TGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAA 120 >seq213709 Length=1542 Score = 86.0 bits (94), Expect = 2e-14 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 195 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 254 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 255 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 314 Query 122 AGGGGATGAGCTGTG 136 | |||||| |||| Sbjct 315 AACAGATGAGTTGTG 329 >seq233260 Length=1422 Score = 84.2 bits (92), Expect = 7e-14 Identities = 123/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 117 AAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGT 176 |||| || ||||| ||||| |||||||||||||| || ||| | ||| ||||||||| Sbjct 310 AAATACGGTGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGT 251 Query 177 TCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC-ACCATCGGGGGTAGAGCACTGT 235 | || ||||| |||||| |||| | | | || | | | | ||||||||||| Sbjct 250 TTTCCGCGAAATCTATTTCAGTAGAACGTATGATGTCGATGACCCGAGGTAGAGCACTCA 191 Query 236 TATGGCTAGGGGG---TCATTGCGACTTACCAAACCATTGCAAACTCCGAAT 284 |||||||| | |||| || |||||||| || | ||||||||||| Sbjct 190 ATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAAT 139 >seq174920 Length=1837 Score = 82.4 bits (90), Expect = 3e-13 Identities = 77/97 (79%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 1738 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 1797 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGA 130 || |||||||||| |||| | ||||| |||||||| Sbjct 1798 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGA 1834 >seq354691 Length=920 Score = 78.8 bits (86), Expect = 3e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 65 AGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGG 124 ||||||||| | ||| | || |||||||| ||||| ||| |||||||||||| || Sbjct 280 AGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCTGAACCGACTGATGTTGAAAAATCAGC 339 Query 125 GGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| ||| ||||| ||||||||||| || Sbjct 340 GGAAGAGTTGTGGTTAGGGGTGAAATGC 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1674797245440