Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_007721.1 Length=1350 Score E Sequences producing significant alignments: (Bits) Value seq9745 91.5 1e-15 >seq9745 Length=7305 Score = 91.5 bits (100), Expect = 1e-15 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1025 AGCACATGGAGATGAGGTTCCCCATCTTCGTGTAATTCTCTGGAAACCCTAATAAATAAT 1084 ||||| |||||| ||||||||| | ||| || ||||||| ||| | | || || Sbjct 6032 AGCACGTGGAGACGAGGTTCCCTGTTTTCATGAGCTTCTCTGCAAATCTTGATGTATTTC 5973 Query 1085 TTATTTACTGGGGTAGAAATATTTTG--TAACTGTGTAAGAGCTTCGTCTTTTGTAAGAG 1142 || |||||||||||| | ||||| ||| || | |||||||| ||||||||||||| Sbjct 5972 TTGTTTACTGGGGTATTTAGGTTTTGAATAATTGAG--AGAGCTTCCTCTTTTGTAAGAG 5915 Query 1143 AACGGTGGGAATAAGTCAAGAAATAATTCTTGGCTTGAATTCTAAATTTTTTAGTCGGTG 1202 | | ||||| ||| || | ||| ||| || | ||| | ||| | ||| || Sbjct 5914 AGCAGTGGGGATATGTTAGAAAAATATTTTTAGAAGAAATGCGAAAACGAGAACTCGTTG 5855 Query 1203 GCATATTTGTAATAAGAGTGATGTCTCC 1230 |||||||||||| | | |||||| || Sbjct 5854 GCATATTTGTAAGTAAATGGATGTCACC 5827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4171999334160