Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq78601 91.5 5e-14 >seq78601 Length=3183 Score = 91.5 bits (100), Expect = 5e-14 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 2692 ATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAA 2751 || ||| | || ||||| ||||| || ||||||||| |||| || || ||||||| || Sbjct 425 ATAAAACTGAATCAAATTGGTACATTAACTGAAACTCTTGAAGCAATAAAAATGGCACAA 366 Query 2752 GAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATC 2811 |||| ||| | | | || || |||||||||||||| |||||| | | || Sbjct 365 AAAGCAAAATATGGTGTTATTATTTCTCATCGTTCAGGTGAAACAGAAGATGCTTCTATA 306 Query 2812 GCTGATATTGCAGTTGCAACTAACG-CTGGTCAAATTAAGACAGGTTCATTGTCACGTAC 2870 || ||| | | || | ||| | || | || ||||| || || ||||| || ||| | Sbjct 305 GCAGATCTATCTGTAGGAAC-ATCGTCAGGACAAATAAAAACTGGTTCCATGAGTCGTTC 247 Query 2871 TGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912 ||| | | ||| |||||||| ||||| || | |||||||| Sbjct 246 TGATAGAACTGCAAAATACAATCAATTAATTAGAATCGAAGA 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154415006718840