Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq301329 111 4e-22 seq156977 87.8 5e-15 >seq301329 Length=1468 Score = 111 bits (122), Expect = 4e-22 Identities = 127/169 (75%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||||| || ||| |||||||||||| | |||||||||||||||| ||||| || Sbjct 180 ATCATTACGCCTTT-GTGTGGGTCGGAACTTATCTGACAAGGAATTTCGCTTCCTTATGA 122 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC----AAGAGCTTCGCGTTAGC 182 || |||| |||||| ||||| || || |||||||||||| | | | | |||| Sbjct 121 CCATTATAGTTACGACCGCCATTCACAGGGGCTTCGATCGCCGACTCTCCTGTCATTAGG 62 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATA 231 | ||| | |||| |||||||||| |||| |||||| ||| ||| Sbjct 61 TCACCAACTTCCTTAATCTTCCGGCACTAGGCAAGCGTCAGCCCCCATA 13 >seq156977 Length=286 Score = 87.8 bits (96), Expect = 5e-15 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 82 GTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGG 141 || |||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||| | Sbjct 71 GTTCAGGTCAGAACTTACCCGACAAGAAATTTTGCTACCTTAATACCGTTATAGTTACAG 12 Query 142 CCGCCGTTTAC 152 |||||||| || Sbjct 11 CCGCCGTTCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1256953147904