Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq265942 84.2 7e-14 >seq265942 Length=631 Score = 84.2 bits (92), Expect = 7e-14 Identities = 114/156 (73%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC---AGTAGCC 216 || || | |||| |||||||||| | || ||||||||||||||| || | |||| Sbjct 290 CGTGTTTTATTACCTAGTTGGTA-GACAATAGCTTACCAAGGCGACCGTCGTCAATAGCT 232 Query 217 GACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGG 276 ||||| | || | ||||| |||| | ||||||| ||||||||||| || ||| Sbjct 231 AGTATGAGAAGTTGGTGAACCACACTGGATAT-AGACACGACCCAAACTCCTATGGAAGG 173 Query 277 CAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCT 312 || |||| |||||| || ||| |||||||| ||| Sbjct 172 CAACAGTAGGGAATTTTCTGCAAAGGGCAAAACCCT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1493030642688