Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq301329 95.1 4e-17 seq156977 78.8 3e-12 >seq301329 Length=1468 Score = 95.1 bits (104), Expect = 4e-17 Identities = 80/97 (82%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| || ||| |||||||||||| | |||||||||||||||| ||||| || Sbjct 179 TCATTACGCCTTT-GTGTGGGTCGGAACTTATCTGACAAGGAATTTCGCTTCCTTATGAC 121 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 |||||||||| |||||| || || |||||||| || Sbjct 120 CATTATAGTTACGACCGCCATTCACAGGGGCTTCGAT 84 >seq156977 Length=286 Score = 78.8 bits (86), Expect = 3e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 400 GTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCA 459 || |||||| |||||||||||||||| ||||| ||||||||| | ||||||||||| Sbjct 71 GTTCAGGTCAGAACTTACCCGACAAGAAATTTTGCTACCTTAATACCGTTATAGTTACAG 12 Query 460 CCGCCGTTTAC 470 |||||||| || Sbjct 11 CCGCCGTTCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1697205773312