Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq347 187 4e-45 seq8823 87.8 3e-15 >seq347 Length=689 Score = 187 bits (206), Expect = 4e-45 Identities = 112/115 (97%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 113 GTACAAAGGGCAGTGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 56 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA 115 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA 1 >seq8823 Length=67207 Score = 87.8 bits (96), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||| ||| ||||||| |||||||| ||||||| | |||| |||||||| | Sbjct 47054 GTACAAAGGACAGAGACATAGTCAATGCGAGCTT-ATGACTCTCCCTTAGTAGGAATT-C 47111 Query 61 CTCGTTGAAGACCAACA 77 ||| ||||||||||||| Sbjct 47112 CTCATTGAAGACCAACA 47128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751914656225