Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq8438 165 2e-38 seq900 89.7 1e-15 >seq8438 Length=4431 Score = 165 bits (182), Expect = 2e-38 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAG-GCCTT-CTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | ||||| ||||| |||||| || |||| ||||||||||||||| Sbjct 363 CTTTACAAGCGGCATTGCCTTTCTTCACTCACGCGATATTGCTGGATCAGGCTTGCGCCC 422 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| || | Sbjct 423 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGG 482 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| || ||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 483 TGTGGCTGATCGTCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTAA 542 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 543 CCAACTACCTAAT 555 >seq900 Length=833 Score = 89.7 bits (98), Expect = 1e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 58 GCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||||| | || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 358 GCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222256795840