Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq8438 111 3e-22 >seq8438 Length=4431 Score = 111 bits (122), Expect = 3e-22 Identities = 159/223 (71%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTT-CATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 ||||| ||||||| | | | |||| | || |||||| | | ||||| |||| || Sbjct 357 AAAGAGCTTTACAAGCGGCATTGCCTTTCTTCACTCACGCGATATTGCTGGATCAGGCTT 416 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || |||||| |||| ||||| |||||||||| ||||| ||||| || ||||||||||| Sbjct 417 GCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAG 476 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | || ||||| || | ||| ||| | ||| |||| | |||| ||| ||| || Sbjct 477 TCCCGGTGTGGCTGATCGTCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTT 536 Query 261 ACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 ||| || |||||||||| ||||| | |||| ||| || Sbjct 537 ACCTAACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068674790080