Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq9882 104 3e-17 >seq9882 Length=79551 Score = 104 bits (114), Expect = 3e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 189340 TTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATG 189399 |||| || ||| |||| ||||| || ||||||||| | || || ||||| || |||||| Sbjct 46215 TTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACACCCATTTCACATG 46156 Query 189400 CTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTT 189459 | || || || ||||| ||| | || || || || | | ||||| ||| | || Sbjct 46155 TTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATTTAGTGTA-TGCATAGTTTTTTTGTA 46097 Query 189460 ACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTT 189519 || ||| || | | |||||||| |||| || || || | ||||||| || Sbjct 46096 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACATATTC 46037 Query 189520 GGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTT 189566 || |||||| || |||| |||||| | || ||||||||||| ||||| Sbjct 46036 GGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633987146910000