Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq962 401 9e-110 seq40945 398 1e-108 seq40921 370 2e-100 seq19643 174 2e-41 seq968 134 2e-29 seq5305 111 2e-22 >seq962 Length=2121 Score = 401 bits (444), Expect = 9e-110 Identities = 245/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 1307 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1250 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1249 CTCGTTCAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 1190 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1189 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 1130 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1129 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCG 1070 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 1069 GCCATAGTCCCTCTAA 1054 >seq40945 Length=12103 Score = 398 bits (440), Expect = 1e-108 Identities = 244/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | Sbjct 5787 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 5844 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5845 CTCGTTCAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 5904 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5905 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 5964 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5965 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCG 6024 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 6025 GCCATAGTCCCTCTAA 6040 >seq40921 Length=111058 Score = 370 bits (410), Expect = 2e-100 Identities = 238/256 (93%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||| | Sbjct 26457 GTACAAAGGGCAGGGACGTAGTCAACGCGAGAT-GATGACTTGCGCTTACTGGGAATT-C 26514 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26515 CTCGTTCAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 26574 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 26575 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 26634 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| | Sbjct 26635 CCCAGAACATCTAAGAGCATCACATACATGTTATTGCCTCAAACTTCTGTGGCCTAAGCG 26694 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 26695 GCCATAGTCCCTCTAA 26710 >seq19643 Length=262 Score = 174 bits (192), Expect = 2e-41 Identities = 146/180 (81%), Gaps = 23/180 (13%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||| | Sbjct 157 GTACAAAGGGTAGGGACGTAGGCAACGCGAGCT-GATGACTTGCGCTTACTAGGAATT-C 100 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| ||||||||||||||||| ||||||||||| Sbjct 99 CTCGTT---------------CAAT------TCCCCATCACGATGAAAATTCAAAGATTA 61 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | ||| ||||| |||||||| |||||| |||||||||||||||||||| |||||||||| Sbjct 60 CTCGGGCCTGTTGGCCAAGGCTATAGACCCGTTGAATACATCAGTGTAGAGCGCGTGCGG 1 >seq968 Length=8291 Score = 134 bits (148), Expect = 2e-29 Identities = 83/86 (97%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 143 GTACAAAGGGCAGGGACGTAGTCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 86 Query 61 CTCGTTGAAGACCAACAATTGCAATG 86 |||||| ||||||||||||||||||| Sbjct 85 CTCGTTCAAGACCAACAATTGCAATG 60 >seq5305 Length=14370 Score = 111 bits (122), Expect = 2e-22 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 107 AATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTG 166 ||||||||||||||||||| | |||| || |||| |||||||||||||| |||||| | Sbjct 8396 AATTTCAAAGATTACCCGGGCATGTCAGCTAAGGCTATAGACTCGTTGAAAACATCACCG 8455 Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGG 197 |||||||| || |||||||| |||||||||| Sbjct 8456 TAGCGCGCATGGGGCCCAGAGCATCTAAGGG 8486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751676079760