Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq40945 129 3e-28 seq962 129 3e-28 seq37337 125 4e-27 seq40921 120 2e-25 seq36593 109 3e-22 >seq40945 Length=12103 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| ||||| || |||||| | Sbjct 6317 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 6375 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 6376 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 6433 >seq962 Length=2121 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| | Sbjct 777 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 719 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 718 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 661 >seq37337 Length=17060 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| | Sbjct 9945 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 9887 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||| | ||||| |||| |||||| |||||||||||||||||||||| Sbjct 9886 TGATCCCTGGTCGGCGTCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 9829 >seq40921 Length=111058 Score = 120 bits (132), Expect = 2e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| |||| ||| ||||| Sbjct 26987 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCAAAGTCCAAAAAGCAACATTTGT 27045 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 27046 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 27103 >seq36593 Length=27190 Score = 109 bits (120), Expect = 3e-22 Identities = 90/107 (84%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 12 CTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCCCGATCCCTAGT 70 |||||||||||| ||||||||| |||| |||| || |||||| | ||||||| || Sbjct 19512 CTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGT 19454 Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 19453 CGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 19407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278283948960