Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq40945 246 1e-62 seq24015 246 1e-62 seq968 246 1e-62 seq40921 233 8e-59 seq40969 224 4e-56 seq5060 123 1e-25 seq42778 120 1e-24 seq24948 114 5e-23 seq37877 100 1e-18 seq7391 93.3 2e-16 seq7365 91.5 6e-16 seq42549 82.4 3e-13 >seq40945 Length=12103 Score = 246 bits (272), Expect = 1e-62 Identities = 228/283 (81%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 4361 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 4302 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||||||| | || || ||| ||| || ||||| ||| | | |||| ||||| || Sbjct 4301 AACCCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 4245 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | | || || || |||| |||||||| |||| ||||||||||||| Sbjct 4244 ACCGACCCTGATCTTTAGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 4185 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 4184 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 4125 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 4124 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 4082 Score = 176 bits (194), Expect = 2e-41 Identities = 138/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| |||| ||| |||||||| | || || || Sbjct 4748 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 4689 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 4688 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 4629 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 4628 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 4584 >seq24015 Length=1372 Score = 246 bits (272), Expect = 1e-62 Identities = 228/283 (81%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 1228 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 1169 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||||||| | || || ||| ||| || ||||| ||| | | |||| ||||| || Sbjct 1168 AACCCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 1112 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | | || || || |||| |||||||| |||| ||||||||||||| Sbjct 1111 ACCGACCCTGATCTTTAGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 1052 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 1051 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 992 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 991 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 949 >seq968 Length=8291 Score = 246 bits (272), Expect = 1e-62 Identities = 228/283 (81%), Gaps = 7/283 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 1573 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 1632 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||||||| | || || ||| ||| || ||||| ||| | | |||| ||||| || Sbjct 1633 AACCCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 1689 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | | || || || |||| |||||||| |||| ||||||||||||| Sbjct 1690 ACCGACCCTGATCTTTAGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 1749 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 1750 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 1809 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 1810 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1852 Score = 176 bits (194), Expect = 2e-41 Identities = 138/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| |||| ||| |||||||| | || || || Sbjct 1186 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 1245 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 1246 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 1305 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 1306 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 1350 >seq40921 Length=111058 Score = 233 bits (258), Expect = 8e-59 Identities = 224/283 (79%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 25031 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAGCGGGCGAGTA 24972 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGG--TGCACCATCG 520 ||||||| | || || ||| ||| || ||||| ||| | || |||||| || Sbjct 24971 AACCCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGATTGCACCGCCG 24915 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | | || || || |||| |||||||| |||| ||||||||||||| Sbjct 24914 ACCGAACCTGATCTTTAGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 24855 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| | Sbjct 24854 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGACGCCCGCAGTGA 24795 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 24794 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24752 Score = 181 bits (200), Expect = 4e-43 Identities = 139/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| | |||||||||||||||||||||||| |||| ||| |||||||| | || || || Sbjct 25418 TCGGCAAGTCGAGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 25359 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 25358 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 25299 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||||| ||||||||| Sbjct 25298 TGTAAAGAGAGTCAAAGAGTGCTTGAAATTGTTGGGAGGGAAGCG 25254 >seq40969 Length=78539 Score = 224 bits (248), Expect = 4e-56 Identities = 223/284 (79%), Gaps = 21/284 (7%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 |||||||||||| ||||||||||||||||||| |||| | ||||||| || Sbjct 18569 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGT-----------AA 18521 Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAGGGTG-CACCATCGA 521 |||||| | || || ||| ||| || ||||| || | || ||||| |||| ||| Sbjct 18520 ACCCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCTCTTGTGGGTGGCACCGCCGA 18464 Query 522 CCGATCCTGATGTCTTCGG--ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 |||| |||||| |||| | | || || |||| |||||||| |||| |||||||||||| Sbjct 18463 CCGACCCTGAT--CTTCAGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAG 18406 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 || |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 18405 ATTATGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 18346 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | || ||||||||||||| Sbjct 18345 ATACTGACGTGCAAATCGTTCGTCTGACTTTGGTATAGGGGCGA 18302 Score = 89.7 bits (98), Expect = 2e-15 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||| |||||||||| |||| ||| ||||||| | || || ||||||| Sbjct 18897 GAGTCGGGTTGTTTAGGAATGCAGCCCTAATCGGGCAGTAAATTCCGTCCAAGGCTAAAT 18838 Query 100 ATTGGCCAGAGACCGATAG 118 |||||| |||||||||||| Sbjct 18837 ATTGGCGAGAGACCGATAG 18819 >seq5060 Length=2372 Score = 123 bits (136), Expect = 1e-25 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 || ||||| |||||||||||||||||| | ||| | | |||||||||| || || ||| Sbjct 1009 CGGCGAGTTGAGTTGTTTGGGAATGCAACCATAATCGAGCGGTAAATTTCATCCAAGGCT 1068 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||| |||| ||| |||||||||| ||||||| | | |||||||||||| ||||| Sbjct 1069 AAATACTGGCGAGACACCGATAGCGAACAAGTACCGCAAGACAAAGATGAAAAGGACTTT 1128 Query 156 GGAAAGAGAGTTAAAAAG 173 | ||||| ||| ||| || Sbjct 1129 GAAAAGATAGTCAAAGAG 1146 Score = 114 bits (126), Expect = 5e-23 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 57 AATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGAT 116 |||||| | ||| | | |||||||||| || || |||||||| |||| ||| |||||| Sbjct 2190 AATGCAACCATAATCGAGCGGTAAATTTCATCCAAGGCTAAATACTGGCGAGACACCGAT 2249 Query 117 AGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCAC 176 |||| ||||||| | | |||||||||||| |||||| ||||| ||| ||| || | Sbjct 2250 AGCGAACAAGTACCGCAAGACAAAGATGAAAAGGACTTTGAAAAGATAGTCAAAGAGTAG 2309 Query 177 GTGAAATTGTTGAAAGGGAAGCG 199 |||| |||| || ||||||||| Sbjct 2310 TTGAAGTTGTCGAGAGGGAAGCG 2332 >seq42778 Length=20237 Score = 120 bits (132), Expect = 1e-24 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 || ||||| ||||||||||||| |||| | ||| | | || ||||||| || || ||| Sbjct 5028 CGGCGAGTTGAGTTGTTTGGGAGTGCAACCATAATCGAGCGGCAAATTTCGTCCAAGGCT 5087 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||| |||| ||| || ||||||| ||||||| | | |||||||||| || ||||| Sbjct 5088 AAATACTGGCGAGACACTGATAGCGAACAAGTACCGCAAGGGAAAGATGAATAGGACTTT 5147 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 | ||||| ||| ||| || | |||| |||| ||||||||| Sbjct 5148 GAAAAGATAGTCAAAGAGTGCTTGAAGTTGTCAGGAGGGAAGCG 5191 >seq24948 Length=1299 Score = 114 bits (126), Expect = 5e-23 Identities = 124/163 (76%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||| ||| ||| || |||||||| |||| ||| ||||||||| || || || Sbjct 393 TCGACGATTCG-GTTTTTCAAAAATGCAGCACTAATCGGGTAGTAAATTTCGTCCAAGGC 451 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||| || | | ||||||| ||||| || || |||| |||| Sbjct 452 TAAATATTGGCAAGAGACTCATGGTGAACAAGTACCGTGATGGACTAATAAAAATGACTT 511 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 | ||||||||| |||||| || ||||||||| | |||||| Sbjct 512 TAAAAAGAGAGTCAAAAAGTACTTGAAATTGTCGGGTGGGAAG 554 >seq37877 Length=74484 Score = 100 bits (110), Expect = 1e-18 Identities = 121/161 (75%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 |||| || ||||||| | ||||| || |||| || || |||||| | || ||||| Sbjct 48450 ACGATTC-AGTTGTTCGAAAATGCGGCCCTAATCAGGTAGTTAATTTCGTTCAAGGCTAA 48392 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTG 156 |||||||| ||||| | |||| | ||||||| |||| ||| ||| |||| |||||| Sbjct 48391 ATATTGGCAAGAGA-CTATAGTGAACAAGTACCGTGAGAGAATGATAAAAAAAGACTTTG 48333 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||||||||||| || | | ||||||||| |||||| Sbjct 48332 AAAAGAGAGTTAAAGAGTGCTTCAAATTGTTGGGTGGGAAG 48292 >seq7391 Length=1736 Score = 93.3 bits (102), Expect = 2e-16 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 57 AATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGAT 116 |||||||| ||| ||| ||||||||| || || ||||||||||||| |||||| || Sbjct 1482 AATGCAGCCGTAATCGGGTAGTAAATTTCGTCCAAGGCTAAATATTGGCAAGAGACTCAT 1541 Query 117 AGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCAC 176 | | ||||||| |||| || || |||| ||||| ||||||||| ||| || | Sbjct 1542 GGTGAACAAGTACCGTGAAGGACTAATAAAAATGACTTTAAAAAGAGAGTCAAAGAGTGC 1601 Query 177 GTGAAATTGTTGAAAGGGAAG 197 ||||||||| | |||||| Sbjct 1602 TTGAAATTGTCGGGTGGGAAG 1622 >seq7365 Length=4470 Score = 91.5 bits (100), Expect = 6e-16 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||| | ||| ||| |||||||||||||||||||||||||||||||||| | Sbjct 447 GTGAACTATACTTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCAATA 506 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| | ||||||| | || || | || |||||| ||| Sbjct 507 CTGACTTGCAAATTGTTCATCTGACTTAGGTATATGGG 544 >seq42549 Length=6027 Score = 82.4 bits (90), Expect = 3e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||| |||| | ||||||| || || ||||||| || ||| | Sbjct 987 CCGAAAGATGGTGAACTATGTCTGAGTGGGGTGAATTCAAAGAAAACTCTAGTTGAGTCC 928 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 | || | || | ||||||||| ||| | | ||||||||||||| Sbjct 927 TGTAGTGACATTGACATGCAAATCGTTCGACTGACTTGGGTATAGGGG 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079046247200