Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq44464 152 7e-35 seq28387 152 7e-35 seq44463 140 5e-31 seq1693 140 5e-31 seq41417 134 2e-29 seq35965 122 1e-25 seq40538 114 2e-23 >seq44464 Length=380861 Score = 152 bits (168), Expect = 7e-35 Identities = 181/243 (74%), Gaps = 12/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 211146 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 211088 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 211087 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 211030 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 211029 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 210979 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 210978 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 210919 Query 246 GTA 248 ||| Sbjct 210918 GTA 210916 >seq28387 Length=32994 Score = 152 bits (168), Expect = 7e-35 Identities = 181/243 (74%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 19356 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 19414 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 19415 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 19472 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 19473 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 19523 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 19524 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 19583 Query 246 GTA 248 ||| Sbjct 19584 GTA 19586 >seq44463 Length=150519 Score = 140 bits (154), Expect = 5e-31 Identities = 180/245 (73%), Gaps = 24/245 (10%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 103788 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 103730 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 103729 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 103683 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 103682 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 103629 Query 186 TAACCACAGTTCACCCGAACGCCT-TAG-TATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| ||| |||||||||||| |||||||||||||||| Sbjct 103628 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTC 103571 Query 244 CGGTA 248 |||| Sbjct 103570 GGGTA 103566 Score = 140 bits (154), Expect = 5e-31 Identities = 180/245 (73%), Gaps = 24/245 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 128668 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 128726 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 128727 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 128773 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 128774 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 128827 Query 186 TAACCACAGTTCACCCGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| || ||||||||||||| |||||||||||||||| Sbjct 128828 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTC 128885 Query 244 CGGTA 248 |||| Sbjct 128886 GGGTA 128890 >seq1693 Length=44973 Score = 140 bits (154), Expect = 5e-31 Identities = 180/245 (73%), Gaps = 24/245 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 22317 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 22375 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 22376 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 22422 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 22423 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 22476 Query 186 TAACCACAGTTCACCCGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| || ||||||||||||| |||||||||||||||| Sbjct 22477 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTC 22534 Query 244 CGGTA 248 |||| Sbjct 22535 GGGTA 22539 >seq41417 Length=704435 Score = 134 bits (148), Expect = 2e-29 Identities = 182/250 (73%), Gaps = 24/250 (10%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | | ||| | ||| || Sbjct 640168 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCCTAC-GACTTTGCGG 640110 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| || || |||||||| || Sbjct 640109 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT-------- 640058 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||| ||||||||||||| |||||||||| Sbjct 640057 --ATGTG-------AGGAG--GCACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAG 640009 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCT-TAG-TATTCTCTACCTGACCACCTGTGTCG 238 ||||||| | |||| | || ||||| ||| |||||||||||| |||||||||||| Sbjct 640008 TTCCTTAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCG 639951 Query 239 GTTTACGGTA 248 |||| |||| Sbjct 639950 GTTTCGGGTA 639941 >seq35965 Length=11408 Score = 122 bits (134), Expect = 1e-25 Identities = 176/245 (72%), Gaps = 24/245 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 7437 CCTTCCGGCACTGGGCAGGCGTCAGGCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 7495 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| | || || ||||||| || Sbjct 7496 TGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGTCATTGCGACCCCCT------------- 7542 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||| ||| ||||||||| ||||| Sbjct 7543 TTGTG----AGGAA--GCACCCCTTCTCCCGAAGTTACGTGGCTTTTTTGCCGATTTCCT 7596 Query 186 TAACCACAGTTCACCCGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| || ||||||||||||| |||| ||||||||||| Sbjct 7597 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACTTGTGTCGGTTTC 7654 Query 244 CGGTA 248 |||| Sbjct 7655 GGGTA 7659 >seq40538 Length=40009 Score = 114 bits (126), Expect = 2e-23 Identities = 171/243 (70%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| |||||||||| || || |||||| | ||||| | ||| || |||| Sbjct 39898 CCTTCCGGCACTGGGCAGGCGTTAGCCCCCATACATGGTCTTAC-GACTTTGCGAAGACC 39840 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || ||||| || | Sbjct 39839 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGGCCCCTT------------- 39793 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| ||||||| || ||||| Sbjct 39792 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCTGAGTTCCT 39739 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | || | | || | || ||||||||||||| |||||||||||||||| | Sbjct 39738 TAGAGAGAGCTGTCTCGCTCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 39679 Query 246 GTA 248 ||| Sbjct 39678 GTA 39676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694100890672