Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq44463 93.3 4e-17 seq1693 93.3 4e-17 seq40538 87.8 2e-15 seq44464 86.0 7e-15 seq28387 86.0 7e-15 seq41417 84.2 2e-14 seq35965 75.2 1e-11 >seq44463 Length=150519 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 103627 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 103684 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 103685 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 103734 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 128829 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 128772 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 128771 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 128722 >seq1693 Length=44973 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 22478 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 22421 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 22420 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 22371 >seq40538 Length=40009 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 39737 TAAGGAACTCAGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 39796 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 39797 --GGCCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 39844 >seq44464 Length=380861 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 210921 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 210980 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 210981 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 211020 >seq28387 Length=32994 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 19581 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 19522 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 19521 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 19482 >seq41417 Length=704435 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||| ||| || |||| ||| | || | | || Sbjct 640002 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCAGGAGAAGGGGTGCCTCCTCACATAGGG 640061 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 640062 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 640109 >seq35965 Length=11408 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||| | |||||| || |||||||||||| || |||| | | | || ||| || Sbjct 7598 TAAGGAAATCGGCAAAAAAGCCACGTAACTTCGGGAGAAGGGGTGCTTCCTCACAAAGGG 7539 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | |||| || ||| |||||| |||||||| |||||||||||| || Sbjct 7538 G--GTCGCAATGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 7491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530971188256