Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq40945 297 3e-78 seq962 297 3e-78 seq40921 251 1e-64 seq7365 107 3e-21 >seq40945 Length=12103 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5931 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5990 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 5991 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 6048 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 6049 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 6108 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 6109 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 6168 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 6169 AGAAAGAGCTCTCAGTCTGTC 6189 >seq962 Length=2121 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1163 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1104 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 1103 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 1046 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 1045 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 986 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 985 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 926 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 925 AGAAAGAGCTCTCAGTCTGTC 905 >seq40921 Length=111058 Score = 251 bits (278), Expect = 1e-64 Identities = 214/261 (82%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 26601 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGAGCATCACATA 26660 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 | ||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 26661 CATGTTATTGCCTCAAACTTCTGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 26718 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 26719 TCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 26778 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||| ||||||| ||||||||| |||||| |||||||||||||||| ||||||||| Sbjct 26779 TTAACCACACAAATCGCTCCACCAAATAAGAATGGCCATGCACCACCACATATAGAATCA 26838 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 26839 AGAAAGAGCTCTCAGTCTGTC 26859 >seq7365 Length=4470 Score = 107 bits (118), Expect = 3e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||||||| ||| ||||| ||||||| | |||||| ||| |||| |||||||| Sbjct 1229 CTATTTAGCAGACTAAAGTCTCATTCGTTAACACAATTAATCAGTAAAATTGCTCCACCA 1170 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||||| ||| || || ||||||||||||||||| ||| || ||| | |||| Sbjct 1169 ATTAAGAACGACCACACATCATCACCCATAGAATCAAGAGAGAACTCTCAGTATGTC 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796456782384