Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq40945 408 7e-112 seq968 408 7e-112 seq16733 387 2e-105 seq40921 376 4e-102 seq40916 286 6e-75 seq40969 239 8e-61 seq13 187 4e-45 seq13284 147 4e-33 seq32230 123 4e-26 seq40742 100 5e-19 seq42200 98.7 2e-18 seq32381 87.8 3e-15 seq43066 84.2 4e-14 >seq40945 Length=12103 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 1974 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 2032 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 2033 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 2092 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2093 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 2152 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 2153 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 2212 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 2213 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 2265 >seq968 Length=8291 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 3960 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 3902 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 3901 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 3842 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3841 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3782 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 3781 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 3722 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 3721 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 3669 >seq16733 Length=1606 Score = 387 bits (428), Expect = 2e-105 Identities = 257/284 (90%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | || |||||||||||||||||||||||||||||| |||||||| Sbjct 357 GAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 299 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||| |||||||||||||| ||||||||| |||||||| ||| ||||||||||| Sbjct 298 AAACCCAGATCACGTTCCCTATTGGTGGGTGAATAATCCAACACTTGGTGAATTCTGCTT 239 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 238 CACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAAGAACGCTTG 179 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| | Sbjct 178 GCTCCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTTTG 119 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || |||||||||||||||||||| |||||| |||| |||||| Sbjct 118 AAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 75 >seq40921 Length=111058 Score = 376 bits (416), Expect = 4e-102 Identities = 260/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 22645 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 22703 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 22704 CGACAGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 22763 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 22764 ATTCTGCTTCACAATGATAGGAAGAGCTGACATCGAAGGATCAAAAAGCAATGTCGCTAT 22823 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||| | Sbjct 22824 GAACACTTGGCTGCCACTAGCCAGTTATCCTTGTGGTAACTTTTCTGACACCTCTAGCTT 22883 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||| | |||||| |||| |||||| Sbjct 22884 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCTCGCTTTCACGGTTCGTATTC 22936 >seq40916 Length=1005 Score = 286 bits (316), Expect = 6e-75 Identities = 189/208 (91%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | || |||||||||||||||||||||||||||||| |||||||| Sbjct 799 GAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 857 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||| |||||||||||||| ||||||||| |||||||| ||| ||||||||||| Sbjct 858 AAACCCAGATCACGTTCCCTATTGGTGGGTGAATAATCCAACACTTGGTGAATTCTGCTT 917 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 918 CACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAAGAACGCTTG 977 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGT 217 ||| |||||||||||||||||||||||| Sbjct 978 GCTCCCACAAGCCAGTTATCCCTGTGGT 1005 >seq40969 Length=78539 Score = 239 bits (264), Expect = 8e-61 Identities = 146/155 (94%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16331 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 16390 Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258 ||||||||||||||||||||||||||||| |||||||||| ||||||| ||| || ||| Sbjct 16391 AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAT 16450 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||||||| |||||| |||| |||||| Sbjct 16451 AGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 16485 >seq13 Length=92105 Score = 187 bits (206), Expect = 4e-45 Identities = 125/138 (91%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||| ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 32903 AAGG-TCATTAAGCAACGTTGCTATGAACACTTGGCTGCCACAAGCCAGTTATCCCTGTG 32845 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 |||||||||||| |||||||||| ||||||| ||| || |||||||||||||||||||| Sbjct 32844 GTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACG 32785 Query 276 CTTTCATGGTTTGTATTC 293 |||||| |||| |||||| Sbjct 32784 CTTTCACGGTTCGTATTC 32767 >seq13284 Length=779 Score = 147 bits (162), Expect = 4e-33 Identities = 97/106 (92%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 169 CAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGG 228 |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 109 CAACGTCGCTATGAACGCTTGGCTGCCAAAAGCCAGTTATCC-TGTGGTAACTTTTCTGA 51 Query 229 CACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 |||| ||||| ||||||| || || |||||||||||||||||||| Sbjct 50 CACCCCTAGCTTCAAATTCTGAAGGTCTAAAGGATCGATAGGCCAC 5 >seq32230 Length=10260 Score = 123 bits (136), Expect = 4e-26 Identities = 190/264 (72%), Gaps = 24/264 (9%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | || |||||| || |||||||||||| | || |||||||||| Sbjct 2865 GAATTACTATTGCGAC-ACTATCATCAATAAGGTAAAACTAACAT--CTTATGACGGTCT 2809 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||| || ||| |||| |||||||| |||||| |||| ||||||| ||| Sbjct 2808 CAAC-----TCTTGTTTGTTATTTGTGGGTGAGAAATCCAGTACTTAGTGAATTCTACTT 2754 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT-----CG---CTATG 181 | |||||||||||| || ||||| || ||| |||||||||||| || ||||| Sbjct 2753 AGCAATGATAGGAAGACCCAACATCAAACGATAAAAAAGCAACGTTAGTACGTTACTATG 2694 Query 182 AA---CGCTTG---GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 || ||| | ||| ||| || ||||||| | | |||||||||||| || |||| Sbjct 2693 AATGTTGCTAGCCAGCTACCATGAGTCAGTTAT-CTTAAGGTAACTTTTCTAACAGCTCT 2635 Query 236 AGCCTCAAATTTCGAGGGACTAAA 259 || |||| ||| | ||||||| Sbjct 2634 CGCTACAAACTTC-AAAGACTAAA 2612 >seq40742 Length=98338 Score = 100 bits (110), Expect = 5e-19 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| || |||||||||||| ||||||| |||||||||| ||| ||||||||||||| Sbjct 92848 TCATCAATAAGGTAAAACTAACATGTCTCACGACGGTCTAATTCCAACTCACGTTCCCTA 92907 Query 91 TTAGTGGGTGAACAA 105 || |||||||||||| Sbjct 92908 TTGGTGGGTGAACAA 92922 >seq42200 Length=135106 Score = 98.7 bits (108), Expect = 2e-18 Identities = 69/78 (88%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 56 TCTCATG---ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 97552 TCTCATGCATATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACA 97493 Query 113 CTTACCGAATTCTGCTTC 130 ||| |||||||||||| Sbjct 97492 CTTGGTGAATTCTGCTTC 97475 >seq32381 Length=264 Score = 87.8 bits (96), Expect = 3e-15 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 191 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 249 Query 61 TGACGGTCTAAACCC 75 |||||||||||||| Sbjct 250 CGACGGTCTAAACCC 264 >seq43066 Length=45344 Score = 84.2 bits (92), Expect = 4e-14 Identities = 86/111 (77%), Gaps = 5/111 (5%) Strand=Plus/Minus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG 136 |||||| || | ||||||||| | ||||||||||| ||| ||||| ||||| || Sbjct 32706 GCTCACTTTTCTTATTAGTGGAT-AACAATCCAACACTTTATGAATTTTGCTTTACAATA 32648 Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAA----AAGCAACGTCGCTATGAA 183 ||||||| | | ||||||||||||| ||| |||||| || |||||||| Sbjct 32647 ATAGGAAAAACAGACATCGAAGGATTAAAAAGCAAGCAATGTTGCTATGAA 32597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854020099584