Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq44463 264 2e-68 seq1693 264 2e-68 seq41417 246 5e-63 seq26747 224 2e-56 seq44464 196 8e-48 seq28387 196 8e-48 seq40540 167 4e-39 seq43254 149 1e-33 seq38347 134 2e-29 seq36616 134 2e-29 seq11210 98.7 2e-18 seq25310 84.2 3e-14 seq8768 84.2 3e-14 seq37135 82.4 1e-13 >seq44463 Length=150519 Score = 264 bits (292), Expect = 2e-68 Identities = 223/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 104718 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 104659 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | |||||| |||||||||| |||| |||||||||||||||||| Sbjct 104658 TTTACCGTGGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 104599 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 104598 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 104539 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 104538 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 104479 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 104478 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 104446 Score = 264 bits (292), Expect = 2e-68 Identities = 223/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 127738 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 127797 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | |||||| |||||||||| |||| |||||||||||||||||| Sbjct 127798 TTTACCGTGGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 127857 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 127858 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 127917 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 127918 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 127977 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 127978 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 128010 >seq1693 Length=44973 Score = 264 bits (292), Expect = 2e-68 Identities = 223/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 21387 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 21446 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | |||||| |||||||||| |||| |||||||||||||||||| Sbjct 21447 TTTACCGTGGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 21506 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 21507 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 21566 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 21567 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 21626 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 21627 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 21659 >seq41417 Length=704435 Score = 246 bits (272), Expect = 5e-63 Identities = 219/273 (80%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 665362 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 665303 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | |||||| |||||||||| |||| || ||||||||||||||| Sbjct 665302 TTTACCGTGGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCGCGGTCCTCTCGTACT 665243 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || ||| |||| |||||| ||||||||||||||| || Sbjct 665242 AGGGAAAGGTCCTCTCAATGCTCTAACGTCCACACCGGATATGGACCGAACTGTCTCACG 665183 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||| || | Sbjct 665182 ACGTTCTGAACCCAGCTCACGTACCACTTTAATGGGCGAACAGCCCAACCTTTGGAACAT 665123 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | | |||||||||| | || |||||||||||| Sbjct 665122 AATACAGCCCCAGGTGGCGAAGAGCCGACATCG 665090 >seq26747 Length=10134 Score = 224 bits (248), Expect = 2e-56 Identities = 220/282 (78%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 958 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 899 Query 63 TATGCACTTGGCAGTACAACTGGT-------GCAC--CAGAGGTTTGTCCATCCCGGTCC 113 | | | | |||| | |||||| |||| ||||||| |||| ||||||||| Sbjct 898 TTTACTGTGGGCACGATAACTGGCACGCCTGGCACGCCAGAGGTGCGTCCTTCCCGGTCC 839 Query 114 TCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAAC 173 |||||||||| ||| || ||||||||| || ||||||| |||||| ||||||||| Sbjct 838 TCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCAAACCGGATATGGACCGAAC 779 Query 174 TGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCC 233 |||||| ||| |||||||||||||||| ||| || ||||||| |||||||| |||||||| Sbjct 778 TGTCTCACGATGTTCTGAACCCAGCTCACGTACCGCTTTAATAGGCGAACAACCCAACCC 719 Query 234 TTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| || |||| |||||||||| | || |||||||||||| Sbjct 718 TTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 677 >seq44464 Length=380861 Score = 196 bits (216), Expect = 8e-48 Identities = 194/251 (77%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 212028 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 211969 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 211968 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 211909 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 211908 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 211849 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || | Sbjct 211848 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 211789 Query 265 AGCCGACATCG 275 || |||||||| Sbjct 211788 AGTCGACATCG 211778 >seq28387 Length=32994 Score = 196 bits (216), Expect = 8e-48 Identities = 194/251 (77%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 18781 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 18840 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 18841 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 18900 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 18901 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 18960 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || | Sbjct 18961 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 19020 Query 265 AGCCGACATCG 275 || |||||||| Sbjct 19021 AGTCGACATCG 19031 >seq40540 Length=14144 Score = 167 bits (184), Expect = 4e-39 Identities = 180/237 (76%), Gaps = 10/237 (4%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| || ||| ||||| ||| |||| ||| |||||| Sbjct 237 GGTGGGCTTACTACTTAGATGCTTTAAGCAGATATCCGCTCCGCACTTGGCTACCCAGCG 178 Query 63 TATGCACTTGGCAGTACAACTGGT-------GCAC--CAGAGGTTTGTCCATCCCGGTCC 113 | | | | |||| | |||||| |||| ||||||| |||| ||||||||| Sbjct 177 TTTACTGTGGGCACGATAACTGGCACGCCTGGCACGCCAGAGGTGCGTCCTTCCCGGTCC 118 Query 114 TCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAAC 173 |||||||||| ||| || ||||||||| || ||||||| |||||| ||||||||| Sbjct 117 TCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCAAACCGGATATGGACCGAAC 58 Query 174 TGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAA 230 |||||| ||| |||||||||||||||| ||| || ||||||| |||||||| ||||| Sbjct 57 TGTCTCACGATGTTCTGAACCCAGCTCACGTACCGCTTTAATAGGCGAACAACCCAA 1 >seq43254 Length=62933 Score = 149 bits (164), Expect = 1e-33 Identities = 117/140 (84%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 79 CAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTC 138 ||||||| |||||||||| |||| ||||| ||||||||||||| ||| || ||||||| Sbjct 57679 CAACTGGCACACCAGAGGTGCGTCCTTCCCGATCCTCTCGTACTAGGGAAAGGTCCTCTC 57620 Query 139 AAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGC 198 || || |||||||| |||||| ||||||||||||||| |||||||||||||| ||| Sbjct 57619 AATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCTAGC 57560 Query 199 TCGCGTGCCTCTTTAATGGG 218 || ||| || ||||||| || Sbjct 57559 TCACGTACCGCTTTAATAGG 57540 >seq38347 Length=121132 Score = 134 bits (148), Expect = 2e-29 Identities = 85/92 (92%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 165 GGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224 ||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||| Sbjct 25335 GGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 25276 Query 225 GCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 ||||||||||||| || |||| |||||||||| Sbjct 25275 GCCCAACCCTTGGAACATACTACAGCCCCAGG 25244 >seq36616 Length=19709 Score = 134 bits (148), Expect = 2e-29 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 ||||||||||| ||||| ||| | ||||||||| || |||||||| |||||| || Sbjct 10856 CCGGTCCTCTCTTACTAGGGAAATTTCCTCTCAATGCTCTAACGCCCACATCGGATATGG 10915 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 |||||||||||| |||||||||||||||||||| ||| || ||||||| ||| |||||| Sbjct 10916 ACCGAACTGTCTTACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATAGGCAAACAGC 10975 Query 227 CCAA 230 |||| Sbjct 10976 CCAA 10979 >seq11210 Length=2930 Score = 98.7 bits (108), Expect = 2e-18 Identities = 113/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 56 TCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTC 115 |||| || ||| |||||| ||||| ||| ||||| ||||| | ||| ||| |||||| Sbjct 528 TCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTC 587 Query 116 TCGTACTAAGGACAGCTCCTCTCAAATTTCC----TACGCCCACGACGGATAGGGACCGA 171 |||||||| || ||||||| || | ||| || || ||| |||| | ||||| Sbjct 588 TCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATATGAACCGA 647 Query 172 ACTGTCTCGCGACGTTCTGAACCCAGCTCGCG 203 |||||||| |||| |||| |||||| ||| || Sbjct 648 ACTGTCTCACGACATTCTAAACCCAACTCACG 679 >seq25310 Length=2021 Score = 84.2 bits (92), Expect = 3e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228 ||||| ||||| ||| || |||||| ||||| ||| || ||||||||||||||| | || Sbjct 1916 CGAACCGTCTCATGACATTTTGAACCAAGCTCACGTACCGCTTTAATGGGCGAACGGTCC 1975 Query 229 AACCCTTGGGACCTACTTCAGCCC 252 ||||||||| || |||| ||||| Sbjct 1976 AACCCTTGGAACATACTATAGCCC 1999 >seq8768 Length=519 Score = 84.2 bits (92), Expect = 3e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228 ||||| ||||| ||| || |||||| ||||| ||| || ||||||||||||||| | || Sbjct 96 CGAACCGTCTCATGACATTTTGAACCAAGCTCACGTACCGCTTTAATGGGCGAACGGTCC 37 Query 229 AACCCTTGGGACCTACTTCAGCCC 252 ||||||||| || |||| ||||| Sbjct 36 AACCCTTGGAACATACTATAGCCC 13 >seq37135 Length=148082 Score = 82.4 bits (90), Expect = 1e-13 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 186 TTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 ||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 102760 TTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 102814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780463674304