Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq44463 262 9e-68 seq1693 262 9e-68 seq41417 248 2e-63 seq44464 217 4e-54 seq29359 208 2e-51 seq33814 82.4 2e-13 seq37135 75.2 3e-11 >seq44463 Length=150519 Score = 262 bits (290), Expect = 9e-68 Identities = 300/398 (75%), Gaps = 4/398 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 98694 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 98753 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 98754 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 98813 Query 133 CTCAACCCCGGGACTGCT-TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 ||||| ||| |||| | | | |||||| | ||| |||| | | ||||||| |||| Sbjct 98814 CTCAA-CCCTGGACAGGTGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAA 98872 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 || | ||| |||||||||||||||||| || | | |||||||| |||||| || Sbjct 98873 TTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTC 98932 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 |||||| | | |||||||||||| ||||||| ||||||| || |||||||||||| Sbjct 98933 TGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACC 98992 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGT 370 | ||||||| ||||||||||||| |||||||| | | | ||| || | | | | Sbjct 98993 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAAT 99051 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | ||| ||||| ||||||| || ||||||||||| Sbjct 99052 GCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 99089 Score = 262 bits (290), Expect = 9e-68 Identities = 300/398 (75%), Gaps = 4/398 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 133762 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 133703 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 133702 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 133643 Query 133 CTCAACCCCGGGACTGCTTTTG-AAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||||| || || | | || ||||| | ||| |||| | | ||||||| |||| Sbjct 133642 CTCAACCCTGG-ACAGGTGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAA 133584 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 || | ||| |||||||||||||||||| || | | |||||||| |||||| || Sbjct 133583 TTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTC 133524 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 |||||| | | |||||||||||| ||||||| ||||||| || |||||||||||| Sbjct 133523 TGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACC 133464 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGT 370 | ||||||| ||||||||||||| |||||||| | | | ||| || | | | | Sbjct 133463 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAAT 133405 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | ||| ||||| ||||||| || ||||||||||| Sbjct 133404 GCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 133367 >seq1693 Length=44973 Score = 262 bits (290), Expect = 9e-68 Identities = 300/398 (75%), Gaps = 4/398 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 27411 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 27352 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 27351 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 27292 Query 133 CTCAACCCCGGGACTGCTTTTG-AAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||||| || || | | || ||||| | ||| |||| | | ||||||| |||| Sbjct 27291 CTCAACCCTGG-ACAGGTGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAA 27233 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 || | ||| |||||||||||||||||| || | | |||||||| |||||| || Sbjct 27232 TTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTC 27173 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 |||||| | | |||||||||||| ||||||| ||||||| || |||||||||||| Sbjct 27172 TGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACC 27113 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGT 370 | ||||||| ||||||||||||| |||||||| | | | ||| || | | | | Sbjct 27112 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAAT 27054 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | ||| ||||| ||||||| || ||||||||||| Sbjct 27053 GCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 27016 >seq41417 Length=704435 Score = 248 bits (274), Expect = 2e-63 Identities = 297/398 (75%), Gaps = 4/398 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||| |||| | ||| || ||||||||||| Sbjct 620839 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCTGTAAGAGAGAGGATGCAAGCGTTATCCG 620898 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 620899 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 620958 Query 133 CTCAACCCCGGGACTGCTTTTGAAA-CTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||||| || || | | ||||| || | ||| |||| | | ||||||| |||| Sbjct 620959 CTCAACCCTGG-ACAGGTGGTGAAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAA 621017 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 || | ||| |||||||||||||||||| || | | |||||||| |||||| || Sbjct 621018 TTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTC 621077 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 |||||| | | ||||| |||||| ||||||| ||||||| || |||||||||||| Sbjct 621078 TGCTGGGCCGACACTGAAACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACC 621137 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGT 370 | ||||||| ||||||||||||| |||||||| | | | ||| || | | | | Sbjct 621138 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAAT 621196 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | ||| ||||| ||||||| || ||||||||||| Sbjct 621197 GCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 621234 >seq44464 Length=380861 Score = 217 bits (240), Expect = 4e-54 Identities = 254/340 (75%), Gaps = 10/340 (3%) Strand=Plus/Plus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 175052 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 175111 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 175112 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 175171 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 175172 AAAGTC---GCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 175225 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| || |||| | | |||||| ||| Sbjct 175226 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTACGAAGGAACGCCAA 175285 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| ||| | ||||||| |||||||| || Sbjct 175286 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGAAAGCATGGGGAGCGAA 175345 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 | ||||||||||||||||||||||| |||||||||||||| Sbjct 175346 CGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 175385 >seq29359 Length=4189 Score = 208 bits (230), Expect = 2e-51 Identities = 252/340 (74%), Gaps = 10/340 (3%) Strand=Plus/Plus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 2079 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 2138 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 2139 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 2198 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 2199 AAAGTC---GCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 2252 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| | |||| | | |||||| ||| Sbjct 2253 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCACAGATCTACGAAGGAACGCCAA 2312 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| ||| | ||||||| |||||||| || Sbjct 2313 AAGCGAAGGCAGCTCTCTGGGTCCCTACAGACGCTGGAGTGCGAAAGCATGGGGAGCGAA 2372 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 | ||||||||||||| ||||||||| |||||||||||||| Sbjct 2373 CGGGATTAGATACCCAGGTAGTCCATGCCGTAAACGATGA 2412 >seq33814 Length=7651 Score = 82.4 bits (90), Expect = 2e-13 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| || |||||| ||||||||||||||||||| || ||| || || ||||||| Sbjct 3979 AAGCATCGACTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGTATTATCCG 3920 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 ||| | |||| |||||| || ||| |||| || |||||| || ||| | | || Sbjct 3919 TAATGATTGGGTGTAAAGCGTCTGTAAGTGGCTTTTTAAGTTCACCGTCAAATCCCAGGG 3860 Query 133 CTCAACCC 140 |||||||| Sbjct 3859 CTCAACCC 3852 >seq37135 Length=148082 Score = 75.2 bits (82), Expect = 3e-11 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT- 358 ||||||||||||| ||||||| ||||||||||||| |||||||| | | | ||| || Sbjct 107714 GGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATC 107656 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | ||| | ||| ||||| ||||||| || ||||||||||| Sbjct 107655 GACCCGTGCAATGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 107606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202665009152