Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq44463 127 4e-27 seq1693 127 4e-27 seq41417 125 1e-26 seq40538 102 1e-19 seq44464 77.0 6e-12 seq36343 77.0 6e-12 seq28387 77.0 6e-12 >seq44463 Length=150519 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| || || ||||||| ||| | ||| || Sbjct 101941 ATGGTGGATACCTAGGCACCCAGAGACGAGGAGGGGCGTAGTAAGCGACGAAATGCTTCG 102000 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 102001 GGGAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCG 102053 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | | | |||||||| ||| || | |||| || ||| ||||||||||||||||| | Sbjct 102054 AAC--TAC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 102110 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 102111 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 102170 Query 247 AGCCT 251 ||||| Sbjct 102171 AGCCT 102175 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| || || ||||||| ||| | ||| || Sbjct 130515 ATGGTGGATACCTAGGCACCCAGAGACGAGGAGGGGCGTAGTAAGCGACGAAATGCTTCG 130456 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 130455 GGGAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCG 130403 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | | | |||||||| ||| || | |||| || ||| ||||||||||||||||| | Sbjct 130402 AAC--TAC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 130346 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 130345 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 130286 Query 247 AGCCT 251 ||||| Sbjct 130285 AGCCT 130281 >seq1693 Length=44973 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| || || ||||||| ||| | ||| || Sbjct 24164 ATGGTGGATACCTAGGCACCCAGAGACGAGGAGGGGCGTAGTAAGCGACGAAATGCTTCG 24105 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 24104 GGGAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCG 24052 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | | | |||||||| ||| || | |||| || ||| ||||||||||||||||| | Sbjct 24051 AAC--TAC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 23995 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 23994 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 23935 Query 247 AGCCT 251 ||||| Sbjct 23934 AGCCT 23930 >seq41417 Length=704435 Score = 125 bits (138), Expect = 1e-26 Identities = 180/248 (73%), Gaps = 17/248 (7%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAA---GCT 64 ||||||||| ||| ||| | || ||| || || ||||||| |||| || ||| Sbjct 638323 ATGGTGGATACCTAGGCACCCAGAGACGAGGAGGGGCGTAGTAA---GCGACAAAATGCT 638379 Query 65 GCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124 |||||||| | ||| | | | |||||| ||||| |||||| || |||| || Sbjct 638380 TCGGGGAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TT 638432 Query 125 TGGGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATC 183 | | | | | |||||||| ||| || | |||| || ||| |||||||||||||||| Sbjct 638433 TCGAAC--TAC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATC 638489 Query 184 TAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGG 243 | |||||| ||||||||||| ||| | ||||||| ||||| ||||||||||||||| Sbjct 638490 TTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGG 638549 Query 244 ATGAGCCT 251 | ||||| Sbjct 638550 AGCAGCCT 638557 >seq40538 Length=40009 Score = 102 bits (112), Expect = 1e-19 Identities = 93/116 (80%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||| ||| || | |||| || ||| ||||||||||||||||| |||||| | Sbjct 26220 TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGA 26279 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| | ||||||| ||||| || ||||||||||||| ||||| Sbjct 26280 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGTGAGCGAAATGGGAGCAGCCT 26335 >seq44464 Length=380861 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 209174 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 209233 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 209234 GGCGAGCGAGAGCGGAT 209250 >seq36343 Length=20378 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 20108 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 20167 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 20168 GGCGAGCGAGAGCGGAT 20184 >seq28387 Length=32994 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 21328 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 21269 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 21268 GGCGAGCGAGAGCGGAT 21252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917991642624