Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq44464 192 2e-46 seq44463 179 1e-42 seq1693 179 1e-42 seq41417 145 3e-32 seq28387 131 6e-28 seq29458 122 3e-25 seq38355 100 1e-18 seq44311 93.3 1e-16 seq21073 93.3 1e-16 seq42664 91.5 5e-16 >seq44464 Length=380861 Score = 192 bits (212), Expect = 2e-46 Identities = 339/490 (69%), Gaps = 27/490 (6%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | |||| | Sbjct 211643 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCTGAATAG- 211585 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 211584 -AC--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 211529 Query 121 TTAAACTACCCACCAGGCACTGTCCC----CAACCCAGATCATGGG--CCAAGGTTAGAT 174 ||||||||||||| ||| |||||| | ||| || | || | |||||| Sbjct 211528 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCCGAATTTTCGGTGCGGCGGTTAGGC 211469 Query 175 ATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCAT 234 |||| | |||||||| ||||| | | ||| | | | Sbjct 211468 ATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGT--------------CGTT-CTGTGT 211424 Query 235 CATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294 ||| ||||||||||||||||||| | | || || | | |||||||||| || Sbjct 211423 CATCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAA 211364 Query 295 GGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353 ||| | ||||||||| |||| ||||| | | ||||||| || | | ||||| Sbjct 211363 GGTGCACGGGGTCTTACCGTCTTGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATT 211304 Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAAC 413 |||||||| | || |||||||| ||| ||||||||| |||||||||||||||| || Sbjct 211303 TCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTAC 211244 Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||| |||||||||||||||||||||||||| |||| |||||| ||||||||||| || Sbjct 211243 TTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGG 211184 Query 474 GGCTTCAATT 483 |||||| ||| Sbjct 211183 GGCTTCCATT 211174 >seq44463 Length=150519 Score = 179 bits (198), Expect = 1e-42 Identities = 389/569 (68%), Gaps = 21/569 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 104311 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 104252 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 104251 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 104193 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| | || | ||| |||||||||| || Sbjct 104192 AGAAACTGTCTACCTGAGACTGTCCCTTGGTCCGTAGGTTCTGGCACAAGGTTAGAATTC 104133 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACT-AGCGTGGCCGCATC 235 | | ||||||||||| ||| | | ||| || || | | | |||| || Sbjct 104132 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGACCCCCCCGGAAGGAGGCCT--TC 104075 Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293 | | | ||||||| || | || || || | || |||||| ||| | | ||||| Sbjct 104074 TTCGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTGA 104017 Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352 || | | |||||||| |||| | || | | ||||||| || | | || Sbjct 104016 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 103957 Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411 ||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||| Sbjct 103956 TTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 103898 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 103897 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 103838 Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531 |||||||| | ||| ||| || || | | |||| | ||| |||||| Sbjct 103837 GGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTC 103784 Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | |||| ||||||||||||| || |||| Sbjct 103783 CGGCACTGGGCAGGCGTCAGCCCCCATAC 103755 Score = 179 bits (198), Expect = 1e-42 Identities = 389/569 (68%), Gaps = 21/569 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 128145 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 128204 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 128205 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 128263 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| | || | ||| |||||||||| || Sbjct 128264 AGAAACTGTCTACCTGAGACTGTCCCTTGGTCCGTAGGTTCTGGCACAAGGTTAGAATTC 128323 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACT-AGCGTGGCCGCATC 235 | | ||||||||||| ||| | | ||| || || | | | |||| || Sbjct 128324 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGACCCCCCCGGAAGGAGGCCT--TC 128381 Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293 | | | ||||||| || | || || || | || |||||| ||| | | ||||| Sbjct 128382 TTCGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTGA 128439 Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352 || | | |||||||| |||| | || | | ||||||| || | | || Sbjct 128440 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 128499 Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411 ||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||| Sbjct 128500 TTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 128558 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 128559 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 128618 Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531 |||||||| | ||| ||| || || | | |||| | ||| |||||| Sbjct 128619 GGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTC 128672 Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | |||| ||||||||||||| || |||| Sbjct 128673 CGGCACTGGGCAGGCGTCAGCCCCCATAC 128701 >seq1693 Length=44973 Score = 179 bits (198), Expect = 1e-42 Identities = 389/569 (68%), Gaps = 21/569 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 21794 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 21853 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 21854 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 21912 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| | || | ||| |||||||||| || Sbjct 21913 AGAAACTGTCTACCTGAGACTGTCCCTTGGTCCGTAGGTTCTGGCACAAGGTTAGAATTC 21972 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACT-AGCGTGGCCGCATC 235 | | ||||||||||| ||| | | ||| || || | | | |||| || Sbjct 21973 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGACCCCCCCGGAAGGAGGCCT--TC 22030 Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293 | | | ||||||| || | || || || | || |||||| ||| | | ||||| Sbjct 22031 TTCGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTGA 22088 Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352 || | | |||||||| |||| | || | | ||||||| || | | || Sbjct 22089 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 22148 Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411 ||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||| Sbjct 22149 TTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 22207 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 22208 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 22267 Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531 |||||||| | ||| ||| || || | | |||| | ||| |||||| Sbjct 22268 GGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTC 22321 Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | |||| ||||||||||||| || |||| Sbjct 22322 CGGCACTGGGCAGGCGTCAGCCCCCATAC 22350 >seq41417 Length=704435 Score = 145 bits (160), Expect = 3e-32 Identities = 213/296 (72%), Gaps = 9/296 (3%) Strand=Plus/Minus Query 267 CCGAATGCCAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGA 325 || || |||||| ||| | | ||||||| | | |||||||| |||| | || | Sbjct 640418 CCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGT 640359 Query 326 AACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG 385 | ||||||| || | | ||||||||| |||| | ||||||| | || Sbjct 640358 AGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAG 640300 Query 386 -TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 640299 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 640240 Query 445 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTG 504 ||||||||||| |||||||| || |||||||| | ||| ||| || | Sbjct 640239 CCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC-GGTCGCCGGCTC-----CCCTTTC 640186 Query 505 GTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||||||||||| |||| ||||||||||||| || |||| Sbjct 640185 ATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 640130 >seq28387 Length=32994 Score = 131 bits (144), Expect = 6e-28 Identities = 93/107 (87%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 377 GCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTA 436 || ||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct 19222 GCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTA 19281 Query 437 CCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 |||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct 19282 CCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 19328 >seq29458 Length=17391 Score = 122 bits (134), Expect = 3e-25 Identities = 76/82 (93%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 12932 TCGTTACGCCTTTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 12873 Query 446 GGTTATAGTTACCACCGCCGTT 467 ||||||||||| ||||||||| Sbjct 12872 AGTTATAGTTACGACCGCCGTT 12851 >seq38355 Length=404585 Score = 100 bits (110), Expect = 1e-18 Identities = 111/147 (76%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct 186400 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGG 186341 Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533 |||||| | ||| ||| || || | | |||| | ||| ||||||| Sbjct 186340 GGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCG 186287 Query 534 GCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| ||||||||||||| || |||| Sbjct 186286 GCACTGGGCAGGCGTCAGCCCCCATAC 186260 >seq44311 Length=20703 Score = 93.3 bits (102), Expect = 1e-16 Identities = 101/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | |||||||| | || |||||||||| ||||||| ||||| Sbjct 12830 ATTTCACCGAGCCTCTCCCTGAGACAGT-GCTCAGATCGTTACGCCTTTCGTGCGGGTCG 12772 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||| |||||||||| ||||||||| | ||||| ||| || | |||| | Sbjct 12771 TAACTTACCCGA-AAGGAATTTCACTACCTTAGAACCTTTATAATTATGACTGTCGTTCA 12713 Query 470 CTGGGGCTTC 479 | || |||| Sbjct 12712 CCGGAACTTC 12703 >seq21073 Length=9368 Score = 93.3 bits (102), Expect = 1e-16 Identities = 101/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | |||||||| | || |||||||||| ||||||| ||||| Sbjct 4542 ATTTCACCGAGCCTCTCCCTGAGACAGT-GCTCAGATCGTTACGCCTTTCGTGCGGGTCG 4484 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||| |||||||||| ||||||||| | ||||| ||| || | |||| | Sbjct 4483 TAACTTACCCGA-AAGGAATTTCACTACCTTAGAACCTTTATAATTATGACTGTCGTTCA 4425 Query 470 CTGGGGCTTC 479 | || |||| Sbjct 4424 CCGGAACTTC 4415 >seq42664 Length=229191 Score = 91.5 bits (100), Expect = 5e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| |||| || |||| ||||||||| ||||| ||||| ||||||||||| Sbjct 64485 TCGTTACGCCTTTCGGGCGGGTCAAAACTTACCCAACAAGAAATTTTTCTACCTTAGGAC 64426 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 ||| ||||||| || | ||| || ||||||||| Sbjct 64425 CGTTGTAGTTACGGCCTCTGTTCACCGGGGCTTCA 64391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701643044864