Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq44463 123 5e-26 seq1693 123 5e-26 seq44464 116 8e-24 seq29359 116 8e-24 seq41417 113 1e-22 seq42733 78.8 2e-12 seq42729 78.8 2e-12 seq502 78.8 2e-12 >seq44463 Length=150519 Score = 123 bits (136), Expect = 5e-26 Identities = 194/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| || | Sbjct 98722 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATACCGTCAT-----------T 98674 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||||| ||| | ||| ||||| Sbjct 98673 GC------TTCTTCTCCTGGAAAAGAAGTTCACGACCCGTAGGCCCTCTA-CCTCCACGC 98621 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 98620 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 98561 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 98560 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 98501 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 98500 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 98462 Score = 123 bits (136), Expect = 5e-26 Identities = 194/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| || | Sbjct 133734 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATACCGTCAT-----------T 133782 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||||| ||| | ||| ||||| Sbjct 133783 GC------TTCTTCTCCTGGAAAAGAAGTTCACGACCCGTAGGCCCTCTA-CCTCCACGC 133835 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 133836 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 133895 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 133896 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 133955 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 133956 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 133994 >seq1693 Length=44973 Score = 123 bits (136), Expect = 5e-26 Identities = 194/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| || | Sbjct 27383 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATACCGTCAT-----------T 27431 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||||| ||| | ||| ||||| Sbjct 27432 GC------TTCTTCTCCTGGAAAAGAAGTTCACGACCCGTAGGCCCTCTA-CCTCCACGC 27484 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 27485 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 27544 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 27545 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 27604 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 27605 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 27643 >seq44464 Length=380861 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 175003 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 174944 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 174943 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 174884 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 174883 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 174824 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 174823 GCAGGCTCATCAAACAGCG 174805 >seq29359 Length=4189 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 2030 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 1971 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 1970 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 1911 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 1910 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 1851 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 1850 GCAGGCTCATCAAACAGCG 1832 >seq41417 Length=704435 Score = 113 bits (124), Expect = 1e-22 Identities = 145/199 (73%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | || ||| ||| | ||| ||||| | | || |||| || Sbjct 620804 AAAAGAAGTTCACCACCCCTAGGCCCTCTA-CCTCCACGCGGCATTTCTCCGTCAGGCTT 620746 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 620745 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 620686 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 620685 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 620626 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 620625 GCCTCACCAACTAGCTAAT 620607 >seq42733 Length=54410 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || |||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||| Sbjct 20839 AAAATTCCTCACTACTGCCTCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCT 20780 Query 214 GACCTTCCTCT 224 || | |||||| Sbjct 20779 GATCATCCTCT 20769 >seq42729 Length=29421 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || |||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||| Sbjct 26243 AAAATTCCTCACTACTGCCTCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCT 26184 Query 214 GACCTTCCTCT 224 || | |||||| Sbjct 26183 GATCATCCTCT 26173 >seq502 Length=54493 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || |||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||| Sbjct 33572 AAAATTCCTCACTACTGCCTCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCT 33631 Query 214 GACCTTCCTCT 224 || | |||||| Sbjct 33632 GATCATCCTCT 33642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068324768768