Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1704 174 1e-38 seq42527 167 2e-36 seq36964 167 2e-36 seq32367 91.5 1e-13 >seq1704 Length=114806 Score = 174 bits (192), Expect = 1e-38 Identities = 579/883 (66%), Gaps = 36/883 (4%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | || || || |||| |||||||| || || || ||||||| Sbjct 97073 TGTTCCCAATCCAATACCCCGAAATCTGGCAAATGTACAAGAAAGCCCTCGCCTCCTTCT 97132 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||| | || || ||||| | ||| | ||| | |||||||| | | | ||| | Sbjct 97133 GGACCGCCGAAGAAGTCGACCTCTCCCACGACCTCCGCGACTGGGACTCCCTCAACGA-C 97191 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || |||| || ||||| | || || | || ||||| ||||| || ||||| |||||| Sbjct 97192 GGCGAACGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTC 97251 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 || ||| | | | | ||| | | || || ||| | | || || || ||| Sbjct 97252 CTCGAAAATCTCGCCGGAAGGTTCATGAAAGAAGTCCAAATCGCCGAAGCACGCGCCTTC 97311 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| ||||| ||||| ||||||| ||||||||||| | || | || Sbjct 97312 TACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTGTTAGAA 97371 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 || ||||||| ||| | || | || | ||| | ||| |||| || || || Sbjct 97372 ACCTACATCAAGGACTCCACCGAGAAACACCGCCTCTTCCACGCCGTCGAAACCATCCC- 97430 Query 61423 GCGGTGAAGCG--GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 | | | ||| |||||| || ||||| | || |||||| | || ||| | | | Sbjct 97431 -CTGCGTCGCGAAGAAAGCCGAGTGGGCGATGAAATGGATCGAC---GCATCGGATTCCT 97486 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC-AGTGGATCGTTT 61539 | | || || || | || || || || || || | || ||| ||| | | | Sbjct 97487 TCGCGGAGCGGGTGGTTGCCTTCGCCTGCGTGGAAGGGATCTTCTTCTCCGGGAGCTTCT 97546 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 | ||| ||||| |||||||| ||||| || || ||||| || || || ||| ||| ||| Sbjct 97547 G-CGCGATCTTCTGGTTGAAAAAACGCGGTCTCATGCCGGGGCTCACGTTCTCCAACGAG 97605 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TG-TTTTGCTATTCAAACGCT 61657 |||| |||||||||||||| | || || ||||| || || || | |||| | || Sbjct 97606 CTGATCTCACGCGACGAGGGGCTTCACTGCGATTTCGCGTGCTTGTTGTATT----CTCT 97661 Query 61658 ATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTA 61717 ||||| ||| | |||||||| ||| | |||||| ||||| ||||| | Sbjct 97662 -TCTGGAGAAGAAGCTTAGCGAGGAGCGCGTGAAGGGGATTGTGCGTGATGCGGTGGAGA 97720 Query 61718 TCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGA 61776 | || ||| ||| || ||||| || |||| | | | | || |||||| | | Sbjct 97721 TTGAGAGGGAGTTTGTGTGCGACGCGCTG-CCGTGTGCGTTGTTGGGGATGAATGGGGAT 97779 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGG-TCGA----TTTGGGTA 61831 | ||| ||||||||||| |||||||| || | |||| | || |||||| Sbjct 97780 CAGATGAGTCAGTATATTGAGTTTGTTGCGGA----TTATTGGCTTGAGAAGCTTGGGTG 97835 Query 61832 TG---AAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGG 61888 || ||| | |||||| | ||||| ||| || ||||| |||||||| || Sbjct 97836 TGGGAAAG----TGTATAATGTGGTGAACCCGTTTCCTTGGATGGAGTTGATTTCGTTGA 97891 Query 61889 ATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | || || || || || || ||||| || || || || || || Sbjct 97892 AGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGAGAGTACCA 97934 >seq42527 Length=94160 Score = 167 bits (184), Expect = 2e-36 Identities = 575/876 (66%), Gaps = 22/876 (3%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | || | |||||| |||||||| || || ||||| || |||| Sbjct 57421 TGTTCCCAATCCAATACCCACAGATTTGGGAAATGTACAAGAAAGCCGAAGCATCGTTCT 57480 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| ||| | || || | ||||||| | | | ||| | Sbjct 57481 GGACGGCGGAGGAGGTTGATCTATCGTCCGATCTCCGCCACTGGGACTCCCTCACCGA-C 57539 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || |||| || ||||| | || || | || ||||| ||||| || ||||| || ||| Sbjct 57540 GGCGAACGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGGATAGTC 57599 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 || ||| | | | | ||| | |||| || ||| | ||||| || ||| Sbjct 57600 CTCGAAAATCTCGCCGGAAGGTTCATGAAGGAAGTCCAATCCGCCGAGGCACGCGCCTTC 57659 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 ||| |||||||||| || || ||||| ||||||| ||||||||||| | || | || Sbjct 57660 TACAGCTTCCAGATCGCGATCGAGAACATCCACTCCGAGATGTACAGCCTCCTGTTAGAA 57719 Query 61363 ACGTACATCAGGGAGCGGGCGG--AACGTGAACGATTGTTCAATGCCATCGAGACGATAC 61420 || ||||||| ||| || | || ||| | ||| ||| | || || || | Sbjct 57720 ACCTACATCAAGGACTCCGCTGAAAAATCCAAC--CTCTTCCGCGCCGTGGAAACCATCC 57777 Query 61421 CGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 | || ||| |||||| || ||||| || || ||||| | | || || || | | Sbjct 57778 CCTGCGTCAAGAAGAAAGCCGAGTGGGCGTTGAAATGGAT--CGACGCCACCGACT-CCT 57834 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC-AGTGGATCGTTT 61539 | | || || | | || || || || || || | || ||| ||| | | | Sbjct 57835 TCGCGGAGCGTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCT 57894 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 | ||| || || ||| |||||||||| || || ||||| || || || || ||| ||| Sbjct 57895 G-CGCCATTTTCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAG 57953 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659 |||| ||||| |||||||| | || || ||||| || ||| | | | |||| Sbjct 57954 CTGATTTCACGTGACGAGGGGCTTCACTGCGATTTCGCGTGCTTGTTGT--ACTCGCT-G 58010 Query 61660 CTGGTGAATCG-TCCGTCG-GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTA 61717 ||| || || | | | |||||||| ||| | |||||| ||||| || || | Sbjct 58011 CTGAGGA--CGAAGCTTAGCGAGGAGCGCGTGAAGGGGATTGTGCGTGACGCAGTGGAGA 58068 Query 61718 TCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGA 61776 | || ||| ||| || ||||| || |||| | | | | || |||||| | | Sbjct 58069 TTGAGAGGGAGTTTGTGTGCGACGCGCTG-CCGTGTGCGTTGGTGGGGATGAATGGGGAT 58127 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTT-GGTCGATTTGGGTATGAA 61835 | ||| ||||||||||| |||||||| || || |||| ||| |||||| || Sbjct 58128 TTGATGAGTCAGTATATTGAGTTTGTTGCGGATCGGTTGTTGGGTGCGCTTGGGTGTG-G 58186 Query 61836 GCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAA 61895 | | | ||| | | | || || ||||||| ||||| |||||||| || | || || Sbjct 58187 GAAGGTGTATGGTGTGCAGAATCCGTTTGATTGGATGGAGTTGATTTCGTTGCAGGGGAA 58246 Query 61896 GACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 ||| ||||| || ||||| || || || || ||||| Sbjct 58247 GACCAATTTCTTTGAGAAGCGCGTTGGGGAGTATCA 58282 >seq36964 Length=242943 Score = 167 bits (184), Expect = 2e-36 Identities = 575/876 (66%), Gaps = 22/876 (3%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | || | |||||| |||||||| || || ||||| || |||| Sbjct 59204 TGTTCCCAATCCAATACCCACAGATTTGGGAAATGTACAAGAAAGCCGAAGCATCGTTCT 59263 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| ||| | || || | ||||||| | | | ||| | Sbjct 59264 GGACGGCGGAGGAGGTTGATCTATCGTCCGATCTCCGCCACTGGGACTCCCTCACCGA-C 59322 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || |||| || ||||| | || || | || ||||| ||||| || ||||| || ||| Sbjct 59323 GGCGAACGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGGATAGTC 59382 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 || ||| | | | | ||| | |||| || ||| | ||||| || ||| Sbjct 59383 CTCGAAAATCTCGCCGGAAGGTTCATGAAGGAAGTCCAATCCGCCGAGGCACGCGCCTTC 59442 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 ||| |||||||||| || || ||||| ||||||| ||||||||||| | || | || Sbjct 59443 TACAGCTTCCAGATCGCGATCGAGAACATCCACTCCGAGATGTACAGCCTCCTGTTAGAA 59502 Query 61363 ACGTACATCAGGGAGCGGGCGG--AACGTGAACGATTGTTCAATGCCATCGAGACGATAC 61420 || ||||||| ||| || | || ||| | ||| ||| | || || || | Sbjct 59503 ACCTACATCAAGGACTCCGCTGAAAAATCCAAC--CTCTTCCGCGCCGTGGAAACCATCC 59560 Query 61421 CGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 | || ||| |||||| || ||||| || || ||||| | | || || || | | Sbjct 59561 CCTGCGTCAAGAAGAAAGCCGAGTGGGCGTTGAAATGGAT--CGACGCCACCGACT-CCT 59617 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC-AGTGGATCGTTT 61539 | | || || | | || || || || || || | || ||| ||| | | | Sbjct 59618 TCGCGGAGCGTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCT 59677 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 | ||| || || ||| |||||||||| || || ||||| || || || || ||| ||| Sbjct 59678 G-CGCCATTTTCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAG 59736 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659 |||| ||||| |||||||| | || || ||||| || ||| | | | |||| Sbjct 59737 CTGATTTCACGTGACGAGGGGCTTCACTGCGATTTCGCGTGCTTGTTGT--ACTCGCT-G 59793 Query 61660 CTGGTGAATCG-TCCGTCG-GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTA 61717 ||| || || | | | |||||||| ||| | |||||| ||||| || || | Sbjct 59794 CTGAGGA--CGAAGCTTAGCGAGGAGCGCGTGAAGGGGATTGTGCGTGACGCAGTGGAGA 59851 Query 61718 TCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGA 61776 | || ||| ||| || ||||| || |||| | | | | || |||||| | | Sbjct 59852 TTGAGAGGGAGTTTGTGTGCGACGCGCTG-CCGTGTGCGTTGGTGGGGATGAATGGGGAT 59910 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTT-GGTCGATTTGGGTATGAA 61835 | ||| ||||||||||| |||||||| || || |||| ||| |||||| || Sbjct 59911 TTGATGAGTCAGTATATTGAGTTTGTTGCGGATCGGTTGTTGGGTGCGCTTGGGTGTG-G 59969 Query 61836 GCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAA 61895 | | | ||| | | | || || ||||||| ||||| |||||||| || | || || Sbjct 59970 GAAGGTGTATGGTGTGCAGAATCCGTTTGATTGGATGGAGTTGATTTCGTTGCAGGGGAA 60029 Query 61896 GACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 ||| ||||| || ||||| || || || || ||||| Sbjct 60030 GACCAATTTCTTTGAGAAGCGCGTTGGGGAGTATCA 60065 >seq32367 Length=12065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || |||||||| |||||||| | ||||||||||| | ||| | ||| Sbjct 3041 ATGTACAAGAAAGCCGAAGCTTCATTCTGGACCGCTGAGGAGGTCGACCTCTCCGACGAC 2982 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | ||||| | | | | ||| || || | || || || | || || |||| Sbjct 2981 CTCCGCCACTGGAACTCCCTGACCGA-CGACGAGCGCCACTTTATCACCCACGTCCTGGC 2923 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 |||||||||||||| ||||| || |||| ||| || | | | | ||| | |||| Sbjct 2922 TTTCTTTGCCGCTTCTGACGGCATTGTCATTGAAAACCTCGCCGGAAGGTTCATGAAGGA 2863 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 || ||| | |||||||| |||||||| |||||||| ||||| ||| Sbjct 2862 AGTCCAATCCGCTGAGGCGCGCGCCTTCTACGGATTCCAGATCGCCATTGAG 2811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397352555912960