Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq3790 96.9 4e-18 seq105 96.9 4e-18 seq4 91.5 2e-16 seq17 84.2 2e-14 seq20 78.8 1e-12 >seq3790 Length=1400220 Score = 96.9 bits (106), Expect = 4e-18 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 488957 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 488899 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 488898 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGG 488841 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 488840 TCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 488795 >seq105 Length=108773 Score = 96.9 bits (106), Expect = 4e-18 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 93998 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 94056 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 94057 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGG 94114 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 94115 TCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 94160 >seq4 Length=27333975 Score = 91.5 bits (100), Expect = 2e-16 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 10787603 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 10787544 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| ||||||||||||||| |||| Sbjct 10787543 GAACTCGGCAAAATGACCCCGTAACTTCGGGATAAGGGGT 10787504 >seq17 Length=21299880 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 8723984 TAAGGAACTCAGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 8724041 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||| || ||| |||||| |||||||| |||||||||||| || Sbjct 8724042 GGGGTTGCACTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 8724091 >seq20 Length=21988590 Score = 78.8 bits (86), Expect = 1e-12 Identities = 63/76 (83%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 48 GAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAA 107 || ||||||| |||||||||| ||| || | |||||||| |||||| ||||| || || Sbjct 16308611 GAGTATACTAGGGCGCTTGAGAGAAACATGTCGAAGGAACTCGGCAAAATGACCTTGAAA 16308670 Query 108 CTTCGGGATAAAGGGT 123 |||| ||||||||||| Sbjct 16308671 CTTCAGGATAAAGGGT 16308686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531130153342