Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-16 seq3790 87.8 2e-15 seq105 87.8 2e-15 seq12 82.4 7e-14 seq17 75.2 1e-11 >seq4 Length=27333975 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 10787471 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 10787412 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 10787411 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 10787377 >seq3790 Length=1400220 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 488842 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 488783 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 488782 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 488737 >seq105 Length=108773 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 94113 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 94172 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 94173 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 94218 >seq12 Length=19065701 Score = 82.4 bits (90), Expect = 7e-14 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 55 ATACCAGGCCGCT-GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGA 113 |||||||| ||| |||||||||||||||||||||| ||||||| || | | || | Sbjct 3374285 ATACCAGGG-GCTAGCGACTGTTTATTAAAAACACATGACTCTGCTAAGAGGTAACACAA 3374343 Query 114 CGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| || | || |||||||||||| ||||||| || Sbjct 3374344 TGTATAGAGTCTAACACCTGCCCGGTGCTGGAAGGTCAA 3374382 >seq17 Length=21299880 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 8724054 ACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 8724113 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| || |||||||| |||||||||||| || Sbjct 8724114 ATGGGGGCTGGCGCCTGCCTAGTGCCGGAAGGTCAA 8724149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476737306313