Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3790 107 2e-21 seq105 107 2e-21 seq4 107 2e-21 seq17 87.8 2e-15 seq12 86.0 7e-15 seq20 80.6 3e-13 seq9604 78.8 1e-12 seq11 75.2 1e-11 seq2 75.2 1e-11 >seq3790 Length=1400220 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 488522 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 488581 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 488582 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 488640 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 488641 ACAAGGAATTTCGCTACCTTAGGACCGTTA 488670 >seq105 Length=108773 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 94433 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 94374 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 94373 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 94315 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 94314 ACAAGGAATTTCGCTACCTTAGGACCGTTA 94285 >seq4 Length=27333975 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 10787167 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 10787226 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 10787227 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 10787286 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 10787287 GACAAGGAATTTCGCTACCTTAGGACAGTTA 10787317 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 18897911 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 18897852 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 18897851 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 18897793 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 18897792 ACAAGGAATTTCGCTACCTTAGGACCGTTA 18897763 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||| | || Sbjct 1269023 TACACCTTTCGTGCGGGTCGGAACTTACGCGACAAGGAATTTCACTACCTTAGGATCATT 1269082 Query 173 A 173 | Sbjct 1269083 A 1269083 >seq17 Length=21299880 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 8724276 TACGCCTTTCGTGCTAGTCGGAACTTACCCAACAAGGAATTTCGCTACCTTAGGACCGTT 8724217 Query 173 A 173 | Sbjct 8724216 A 8724216 >seq12 Length=19065701 Score = 86.0 bits (94), Expect = 7e-15 Identities = 107/151 (71%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| | ||| | |||| | |||||||||| || | | ||||||||||| Sbjct 3374589 CGGGGTCTTATTGTCTAGCTGTTGGTAGCCTGCATCTTCACGGAGAATTCAATTTCACTG 3374530 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| ||||||||||||||| || | ||||| | Sbjct 3374529 GGTCCATGTCAGAGACAGCAGGGCAGTCGTTACACCATTCGTGCAAGTTGCTACTTATGC 3374470 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| |||| ||||||| |||| Sbjct 3374469 GACAAGGAATTTCACTACGTTAGGACAGTTA 3374439 >seq20 Length=21988590 Score = 80.6 bits (88), Expect = 3e-13 Identities = 92/128 (72%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| || |||||||||| || | | |||||||||| | || | ||||||| Sbjct 16309000 GGTACTCCGCATCTTCACGGAGAATTCAATTTCACTAGGTCCATGTCGGAGACAGTGGGG 16308941 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 ||||||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct 16308940 TAGTCATTACACCATTCGTGCAGGTCACTACTTATGCGACAAGGAATTTCCATAGCTTAG 16308881 Query 166 GACCGTTA 173 || |||| Sbjct 16308880 GATAGTTA 16308873 >seq9604 Length=50085 Score = 78.8 bits (86), Expect = 1e-12 Identities = 101/141 (72%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | |||||| | | Sbjct 48522 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCA-TCAA 48464 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 48463 CCCTCTCTCCGAGACAGTGCCTAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 48404 Query 144 ACAAGGAATTTCGCTACCTTA 164 |||||||||||| |||||||| Sbjct 48403 ACAAGGAATTTCACTACCTTA 48383 >seq11 Length=35963958 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||| ||| |||| ||||||| |||||||||||||||||||||||||||||| Sbjct 21245884 TACGCCTTTCATGCGGGTCAGAACTTATATGACAAGGAATTTCGCTACCTTAGGACCGTT 21245943 Query 173 A 173 | Sbjct 21245944 A 21245944 >seq2 Length=24697652 Score = 75.2 bits (82), Expect = 1e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 121 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 169 |||||||||| |||||||||| |||||| |||||||||||||||||||| Sbjct 7760707 TCGTGCAGGTTGGAACTTACCTGACAAGCAATTTCGCTACCTTAGGACC 7760659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547128049527