Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq13237 86.0 7e-15 seq20 75.2 1e-11 >seq13237 Length=1619 Score = 86.0 bits (94), Expect = 7e-15 Identities = 84/106 (79%), Gaps = 8/106 (8%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||||||||||||||||| |||||| | ||| Sbjct 1288 AAACCAACAAAATAGAACCGAA-GTCCTATTCTATTATTCCATGCAGATGTATGCAGGC- 1231 Query 70 TAAGCCTGC-----TTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||| ||||| ||||||||||| |||| ||||| || Sbjct 1230 -AAACCTGCCATATTTTGAGCACTCTAATTTGTTCAAAGTAAACGT 1186 >seq20 Length=21988590 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 44 TTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102 ||||||||||||||||||| | | ||||| || |||||||| ||||||||||| |||| Sbjct 16588925 TTATTCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAA 16588866 Query 103 GTAAAAGT 110 |||| ||| Sbjct 16588865 GTAATAGT 16588858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595121738082