Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq11748 145 1e-32 seq17 136 7e-30 seq5917 131 3e-28 seq5 118 2e-24 seq12513 84.2 4e-14 seq4 82.4 1e-13 seq7 77.0 5e-12 >seq11748 Length=70187 Score = 145 bits (160), Expect = 1e-32 Identities = 199/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 66534 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 66475 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | |||| || Sbjct 66474 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCCTACTCCAG 66415 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 66414 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 66355 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 66354 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 66295 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 66294 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 66257 >seq17 Length=21299880 Score = 136 bits (150), Expect = 7e-30 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| | Sbjct 18836172 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCCT 18836113 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 18836112 TCCTTCGTAGATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 18836053 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179 ||||| || ||||| | ||| | | ||| | | | |||||| | || Sbjct 18836052 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 18835996 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | |||||||| ||||||||| |||| | | |||| | ||| |||||| || | Sbjct 18835995 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCC 18835936 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 18835935 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 18835890 Score = 131 bits (144), Expect = 3e-28 Identities = 200/285 (70%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 8719048 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 8718989 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | |||| || Sbjct 8718988 CCGATCTCTACGCATTTCACCGCTCCACCAGAAATTCCCTCTGCCCCTACCCTACTCCAG 8718929 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 8718928 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 8718869 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||| | | |||||| |||||| | ||| |||||||||||| ||| || ||| Sbjct 8718868 AGCCACCTATAGACGCTTTACGCCCAATCATTCCAGATAACGCTTGCATCCTTTGTGTTA 8718809 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || ||||||||||||| ||||||| | ||||||||| ||| || Sbjct 8718808 CCACGGCTGCTGGCACAGAGTTAGCTGATGCTTATTCCCCAGATA 8718764 >seq5917 Length=21838 Score = 131 bits (144), Expect = 3e-28 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 47 TTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGAT 106 |||||| |||||||| | | || |||||||||||||||||| ||| | |||||| Sbjct 2159 TTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTC 2100 Query 107 TGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT 166 |||| || | |||| || |||||| | || | ||||||||||| | Sbjct 2099 TGCCCCTACCCTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGA 2040 Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226 ||| || | |||| || |||||| | |||||| |||||| | |||||||||| Sbjct 2039 TTTGACGGCGAACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAAC 1980 Query 227 GCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||| ||| || ||||||||||||||||||| ||||||||| ||||||||| Sbjct 1979 GCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 1923 >seq5 Length=26376911 Score = 118 bits (130), Expect = 2e-24 Identities = 193/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 24033617 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 24033676 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||||||||||||||| ||| | |||||| | || || | ||| || Sbjct 24033677 CCGATCTCTACGCATTTCACCGCACCACCGGAAATTCCCTCTACCCCTACCCTACTTCAG 24033736 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 24033737 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 24033796 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| | ||| Sbjct 24033797 AGCCACCTACAGACACTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTATCTTA 24033856 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||| ||||| |||| ||||||||| ||||||||| Sbjct 24033857 CCGCGACTGCTAGCACAGAGTTAGCCGATGCTTATTCC 24033894 Score = 75.2 bits (82), Expect = 2e-11 Identities = 153/226 (68%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 55 TGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTC 114 |||||||| | | || | || ||||||||||||| || | |||||| |||| | Sbjct 24344251 TGGTGTTCTTTCTGATCTTTATGCATTTCACCGCTCCATTGGAAATTCCTTCTGCCCGTA 24344192 Query 115 CAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACAT 174 | |||| || |||||| | ||| ||| ||||||||||| | ||| | Sbjct 24344191 CTCTACTCCAGTTTGGTAGTTTCCACTGCCTTCTA-GGGTTGAGCCCTAGGATTTGATTG 24344133 Query 175 CTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCA 234 | |||| | || |||| | | ||||| |||||| | || ||||||| | ||| Sbjct 24344132 CGAACTTAAAATGCCACCTATAGACGCTTTATGCCCAATCATTCTGGATAACACATGCAT 24344073 Query 235 CCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTAT 280 ||| || ||||| ||||||||| ||| ||||| ||| |||||| Sbjct 24344072 CCTCTGTCTTACCACGGCTGCTGACACAGAGTTAACCGATGCTTAT 24344027 >seq12513 Length=317817 Score = 84.2 bits (92), Expect = 4e-14 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||| | | |||||| | |||| | ||| |||||||||||| ||| || ||||| Sbjct 293199 CCACCTATAGACGCTTTACGCTCAATCATTCCAGATAACGCTTGCATCCTCTGTCTTACC 293258 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 | |||||||||||| ||||||||| ||||||||| Sbjct 293259 GTGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 293294 >seq4 Length=27333975 Score = 82.4 bits (90), Expect = 1e-13 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 |||||| | ||||| | |||| | |||||||||||||||| ||| || ||||||| Sbjct 1622335 CCTACAGACGCTTTATGCTCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCA 1622394 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||| |||||| || | ||||||| ||| || Sbjct 1622395 GCTGCTGGCACAGAGTTAGTCGATGATTATTCCCCAGATA 1622434 >seq7 Length=19782170 Score = 77.0 bits (84), Expect = 5e-12 Identities = 160/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 || |||||| |||||||| | | || ||||| |||||||| ||| || |||||| Sbjct 19769159 GCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACACATTTCACTGCTCCATCAAAAATTCC 19769218 Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT 163 |||| | | |||| || |||||| | || | | |||||||||| Sbjct 19769219 CTGTGCCCGTACCATACTCCAGCTTGGTAGTTTCCACCGCCTACCA-GGGTTGAGCCTTA 19769277 Query 164 AGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGAT 223 | ||| || | |||| || |||| | | |||||| |||||| | || |||| Sbjct 19769278 GGATTTGACGGCGAACTTAAAAAGCCACCTATAGACGCTTTACGCCCAATCATTCTGGAT 19769337 Query 224 AACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTAT 280 ||||||||| ||| || ||||||||||||||| ||| |||||| || | |||| Sbjct 19769338 AACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGACACAGAGTTAGACGATGTTTAT 19769394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828691022383