Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq12564 127 4e-27 seq6271 127 4e-27 seq105 127 4e-27 seq14 127 4e-27 seq17 118 2e-24 seq11 118 2e-24 seq19 89.7 9e-16 seq7 89.7 9e-16 seq5359 86.0 1e-14 seq15 77.0 6e-12 seq4 77.0 6e-12 >seq12564 Length=153505 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 109300 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 109241 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 109240 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 109188 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| || || | |||| || ||| ||||||||||||||||| | Sbjct 109187 AAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 109131 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 109130 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 109071 Query 247 AGCCT 251 ||||| Sbjct 109070 AGCCT 109066 >seq6271 Length=19749 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 4077 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 4018 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 4017 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 3965 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| || || | |||| || ||| ||||||||||||||||| | Sbjct 3964 AAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 3908 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 3907 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 3848 Query 247 AGCCT 251 ||||| Sbjct 3847 AGCCT 3843 >seq105 Length=108773 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 92368 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 92427 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 92428 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 92480 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| || || | |||| || ||| ||||||||||||||||| | Sbjct 92481 AAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 92537 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 92538 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 92597 Query 247 AGCCT 251 ||||| Sbjct 92598 AGCCT 92602 >seq14 Length=16251777 Score = 127 bits (140), Expect = 4e-27 Identities = 178/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 978317 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 978258 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 978257 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 978205 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| || || | |||| || ||| ||||||||||||||||| | Sbjct 978204 AAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 978148 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 978147 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 978088 Query 247 AGCCT 251 ||||| Sbjct 978087 AGCCT 978083 >seq17 Length=21299880 Score = 118 bits (130), Expect = 2e-24 Identities = 176/245 (72%), Gaps = 11/245 (4%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 8722299 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 8722358 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 8722359 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 8722411 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| | || | |||| || ||| ||||||||||||||||| | Sbjct 8722412 AAC--TGC-TGCTGAATCCCCGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 8722468 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| ||||||||||||| || Sbjct 8722469 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGAGAGC 8722528 Query 247 AGCCT 251 ||||| Sbjct 8722529 AGCCT 8722533 >seq11 Length=35963958 Score = 118 bits (130), Expect = 2e-24 Identities = 176/245 (72%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | || | Sbjct 10701699 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATACTTCA 10701640 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||||| | ||| | | | |||||| ||||| |||||| || ||| ||| | Sbjct 10701639 GGGAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACT------TTTCG 10701587 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| || || | |||| || ||| ||||||||||||||||| | Sbjct 10701586 AAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 10701530 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 10701529 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGC 10701470 Query 247 AGCCT 251 ||||| Sbjct 10701469 AGCCT 10701465 >seq19 Length=18159812 Score = 89.7 bits (98), Expect = 9e-16 Identities = 83/104 (80%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||| || || | |||| || ||| ||||||||||||||||| |||||| ||| Sbjct 9666867 CTGAATCCACGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG 9666808 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 |||||||| ||| | ||||||| ||||| ||||||||||||| Sbjct 9666807 AAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATG 9666764 >seq7 Length=19782170 Score = 89.7 bits (98), Expect = 9e-16 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 || ||||| || |||| |||| || ||| | | ||||||||||||| ||||| | Sbjct 9225458 TGTTGAATCCACGGGTAGGCAAGAGACAACTTGACAAACTGAAACATCTTAGTAGTCAGA 9225399 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| | |||||||| ||||| ||||||| |||||||| ||||| Sbjct 9225398 GGAAAAGAAAGCAAAAGTGATTCCCATAGTAGCGGCGAGCAAAATGGGAGCAGCCT 9225343 >seq5359 Length=5054 Score = 86.0 bits (94), Expect = 1e-14 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 136 ATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGC 194 || || ||| ||| || |||||| || ||| | ||||||||| |||| ||||||| Sbjct 4455 ATTCTTAATCCATGGGCATGCAAGAGAAAACCTAGGGAACTGAAATATCTTAGTAGCTAA 4396 Query 195 AGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||||||||||| ||| | ||||||| | ||| |||||||||||| ||| ||||| Sbjct 4395 AGGAAAAGAAAGCAAAAGCGATTCCCGATGTAACGGCGAGCGAAATAGGAGCAGCCT 4339 >seq15 Length=20964703 Score = 77.0 bits (84), Expect = 6e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 7993432 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 7993491 Query 229 GGCGAGCGAAATGGGATGAGCCTTT 253 ||||||||| | |||| | |||| Sbjct 7993492 GGCGAGCGAGAGCGGATTGGGCTTT 7993516 >seq4 Length=27333975 Score = 77.0 bits (84), Expect = 6e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 10789366 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 10789307 Query 229 GGCGAGCGAAATGGGATGAGCCTTT 253 ||||||||| | |||| | |||| Sbjct 10789306 GGCGAGCGAGAGCGGATTGGGCTTT 10789282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918275345568