Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 233 2e-56 seq9 188 6e-43 seq11 181 8e-41 >seq2 Length=24697652 Score = 233 bits (258), Expect = 2e-56 Identities = 600/898 (67%), Gaps = 28/898 (3%) Strand=Plus/Minus Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104 || ||| ||||||| ||||||| ||| | || | || ||| ||||||||| Sbjct 21047505 AACCCTGATCGTTTCTGCATGTTCCCAATCCAATACCCTCAGATCTGGGAAATGTACAAA 21047446 Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 || || |||||||| |||||||| | || || |||||| | || |||| | || Sbjct 21047445 AAAGCAGAAGCTTCATTCTGGACCGCCGAAGAAGTCGATCTCTCTCAAGATCTCCGCCAC 21047386 Query 61165 TGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223 ||||| | | | ||| ||| |||| || ||||| ||||| | | || ||||| || Sbjct 21047385 TGGGACTCCCTCACCGA-CGGCGAACGCCACTTCATCAAACACATCCTCGCTTTCTTCGC 21047327 Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGT 61283 |||||| ||||| |||||| ||| || | | | | ||| | ||| | ||||| Sbjct 21047326 CGCTTCCGACGGAATCGTCCTTGAAAACCTCGCCGGAAGGTTCATGACAGAGATACAAGT 21047267 Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343 | ||||||||| ||||||||||||||||| || || |||||| |||| || ||||| Sbjct 21047266 CGCTGAGGCGCGTGCATTCTACGGCTTCCAGATCGCAATCGAGAATATCCATTCTGAGAT 21047207 Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403 ||| ||| | || | || ||||| |||| || || || | ||||| ||| | Sbjct 21047206 GTATAGTCTCCTTCTTGAAACGTATATCAAAGATTCCGCTGATAAAAATCGATTATTCCA 21047147 Query 61404 TGCCATCGAGACGATACCG-GCGGTG--AAGCGGAAAGCGGATTGGGC-CTTCAATTGGA 61459 || || ||||||||||| ||| || || ||||| || ||||| |||| ||||| Sbjct 21047146 CGCAATAGAGACGATACCTTGCGTTGCTAAA---AAAGCTGAGTGGGCGCTTCG-TTGGA 21047091 Query 61460 TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTG 61519 || | || || | | || | |||||| | | || ||||| || || ||| Sbjct 21047090 TCGACGGTTCA---GAATCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTA 21047034 Query 61520 TATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCG 61579 | || ||| |||| || || || ||||||||||||||||| || |||||||| | Sbjct 21047033 TTTTCTTCTCTGGAAGCTTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTG 21046974 Query 61580 GTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-- 61637 |||| |||||| || ||||| || || || || ||||| | || |||||||| || Sbjct 21046973 GTCTTACCTTCTCAAACGAGTTAATCTCGCGAGATGAGGGTTTACACTGTGATTTCGCGT 21046914 Query 61638 ---TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694 |||| | || || || | || ||| | || | || ||||| ||| | Sbjct 21046913 GCTTGTTGTACT-CTCTAATG-AAT---AAGAAGCTTC---CAGAAGAGCGCGTGAAGGG 21046862 Query 61695 GATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC 61754 |||||| ||||| ||||| || || ||| ||| || |||||| | || | | Sbjct 21046861 GATTGTGCGTGATGCGGTTGAAATAGAGAGGGAGTTTGTGTGTGACGCGCTTCCATGCGC 21046802 Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814 | | || |||||| | || | ||| || |||||||| || || || || | | Sbjct 21046801 GTTGGTGGGGATGAATGGGGGTTTGATGAGTCAATATATTGAGTTCGTAGCTGATAGGTT 21046742 Query 61815 GTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 || ||| |||||| || | | | ||| || | ||||||| ||||||| |||| Sbjct 21046741 ATTGGGTGCGCTTGGGTGTG-GGAAGGTGTATGATGTGCAAAACCCTTTTGATTGGATGG 21046683 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | |||||||||| | || ||||| ||||| || ||||| | || || || || || Sbjct 21046682 AATTGATTTCGCTTCAGGGGAAGACTAATTTCTTTGAGAAGAGGGTTGGTGAATACCA 21046625 >seq9 Length=21753712 Score = 188 bits (208), Expect = 6e-43 Identities = 550/839 (66%), Gaps = 10/839 (1%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || |||||||| |||||||| | || || |||||| | || |||| Sbjct 19304461 ATGTACAAGAAAGCCGAAGCTTCATTCTGGACCGCCGAAGAAGTCGATCTTTCTCAAGAT 19304402 Query 61156 ATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | | ||||| | | | ||| || ||||| || ||||| ||||| | | || Sbjct 19304401 CTTCGCCATTGGGATTCTCTCACCGA-CGATGAACGCCACTTCATCAAACACATCCTCGC 19304343 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| ||||| ||| || | | | | ||| | | Sbjct 19304342 CTTCTTCGCCGCCTCCGACGGAATCGTTCTTGAAAACCTCGCCGGAAGGTTCATGACTCA 19304283 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 | ||||| | ||||||||| ||||||||||||||| || ||||| || ||| |||| Sbjct 19304282 AATTCAAGTCGCTGAGGCGCGTGCTTTCTACGGCTTCCAAATCGCCATTGAAAATATCCA 19304223 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| |||||||| || | || |||| || || |||| || || || | || Sbjct 19304222 CTCTGAGATGTATAGCCTCCTTCTCGAAACATATATCAAAGACTCCGCTGATAAAAACCG 19304163 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 ||| ||| | || || || || || || || | |||||| || ||||| || Sbjct 19304162 ATTATTCCACGCGATTGAAACCATTCCTTGTGTTACAAAGAAAGCTGAATGGGCGTTACG 19304103 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 |||||| | || || | | || | ||||| | | || ||||| || || Sbjct 19304102 ATGGATCGACGGTTCA---GAATCCTTCGCAGAACGCCTCGTTGCTTTTGCTTGCGTTGA 19304046 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 || |||||||| |||| || || || |||||| | || ||||| || | || Sbjct 19304045 AGGAATATTTTTCTCTGGAAGCTTCTGTGCGATATTTTGGCTTAAAAAACGCGGGTTAAT 19303986 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 ||||||||| || ||| || ||||||||||| || || || || | ||||||||||| Sbjct 19303985 GCCCGGTCTTACATTCTCGAACGAGTTGATATCGCGAGATGAAGGGCTTCATTGTGATTT 19303926 Query 61635 TGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694 ||| ||| ||| | | ||| || ||| | | |||||||||||| | Sbjct 19303925 CGCTTGTTTATTAT--ACTCTCTA-ATGAAGAAGAAGCTTCCAGAGGAGCGTGTGAAGGG 19303869 Query 61695 GATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC 61754 ||||||||||| || || ||||| || ||| || |||||| | || | Sbjct 19303868 AATTGTTCGTGACGCAGTGGAGATCGAGAGAGAGTTTGTGTGTGACGCGCTTCCATGTGC 19303809 Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814 | | || |||||| | | | ||| |||||||| || |||||||| || | | Sbjct 19303808 GTTGGTGGGAATGAATGGGGTTTTGATGAGTCAGTATATAGAGTTTGTTGCGGATAGGTT 19303749 Query 61815 GTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 || ||| |||||| || | | | ||| | | | ||||| ||||||| |||| Sbjct 19303748 ATTGGGTGCGCTTGGGTGTG-GGAAGGTGTATGAAGTGCAGAACCCTTTTGATTGGATGG 19303690 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 | |||||||||| | || ||||| ||||| || ||||| | || || || |||||| Sbjct 19303689 AACTGATTTCGCTTCAAGGGAAGACTAATTTCTTTGAGAAGAGGGTTGGGGAATATCAA 19303631 >seq11 Length=35963958 Score = 181 bits (200), Expect = 8e-41 Identities = 550/839 (66%), Gaps = 12/839 (1%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||| || || || ||||| || |||||||| | ||||| || ||| | || | ||| Sbjct 2850192 ATGTATAAGAAAGCCGAAGCATCTTTCTGGACCGCCGAGGAAGTTGATCTTTCTCAGGAC 2850251 Query 61156 ATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | |||||||| | | ||| ||| |||| || || | ||||| || | || Sbjct 2850252 GTCCGCCACTGGGAGAACCTCACCGA-CGGCGAACGCCACTTTGTCAAACACGTCCTCGC 2850310 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT-TTATTGGAACGTTTCGCGCAGG 61273 ||||| ||||| || ||||||||||| ||| || || |||| |||| | | Sbjct 2850311 TTTCTTCGCCGCCTCTGACGGTATCGTTCTTGAAAACCTTGCCGGAAGGTTTATGACTGA 2850370 Query 61274 AGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCC 61333 | | ||||| | ||||||||| ||||||||| ||||| ||||| || || ||| ||| Sbjct 2850371 AA-TCCAAGTCGCTGAGGCGCGTGCTTTCTACGGATTCCAAATTGCTATTGAAAATATCC 2850429 Query 61334 ACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAAC 61393 | || |||||||||||| | || | || || || |||| ||| ||| || | | Sbjct 2850430 ATTCTGAGATGTACAGTCTCCTTCTTGAAACATATATCAAGGATTCGGCTGATAAAAACC 2850489 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | |||||| | || | || || || || || | ||||||| || ||||| || Sbjct 2850490 GTTTGTTCCACGCGGTTGAAACAATCCCTTGTGTTGCGAGGAAAGCTGAGTGGGCGTTAC 2850549 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 ||||||| || || | | || | ||| || | | || ||||| || | Sbjct 2850550 GTTGGATCGATGGTTCA---GAATCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTG 2850606 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 | || | || ||| |||| || || || || ||| | ||||| | || |||| Sbjct 2850607 AAGGAATTTTCTTCTCTGGAAGCTTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTA 2850666 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || || |||||| || ||||||||||| || || || || | |||||||||| Sbjct 2850667 TGCCTGGACTTACCTTCTCAAACGAGTTGATATCGCGAGATGAAGGGCTTCATTGTGATT 2850726 Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTG 61693 | ||| ||| | | | | ||| || |||| | || |||||||||||| | Sbjct 2850727 TCGCTTGCTTGTTGT--ACTCTCTA-ATGAAGAATAAGCTTTCAGAGGAGCGTGTGAAGG 2850783 Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 |||||| ||||| || || || || ||| ||| | |||||| | || Sbjct 2850784 GGATTGTGCGTGATGCTGTGGAGATAGAGAGGGAGTTTGTTTGTGACGCACTTCCATGTG 2850843 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 | | | || |||||| | | | ||| || |||||||| |||||||| || | Sbjct 2850844 CGTTGGTTGGGATGAATGGGGTTTTGATGAGTCAATATATTGAGTTTGTTGCGGATAGGT 2850903 Query 61814 TGTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATG 61872 | || ||| |||||| || || | ||| || | | ||||| ||||||| ||| Sbjct 2850904 TATTGGGTGCGCTTGGGTGTGGTAAGG-TGTATGATGTGCAGAACCCGTTTGATTGGATG 2850962 Query 61873 GACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || | |||||||| | || ||||| ||||| || ||||| | || || || ||||| Sbjct 2850963 GAACTAATTTCGCTTCAAGGGAAGACTAATTTCTTTGAGAAGAGGGTTGGTGATTATCA 2851021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397502233928720