Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07] 4,547 sequences; 377,833,576 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq464 219 8e-55 seq3668 77.0 6e-12 >seq464 Length=1457561 Score = 219 bits (242), Expect = 8e-55 Identities = 219/280 (78%), Gaps = 3/280 (1%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| || | || | |||| || |||||||||| ||||||||||| || Sbjct 848031 TGGCCTTAACTGGCTGGGTCGTGCCTCCAGTGCTGTTACTTTGAAGAAATTAGAGTGCTC 847972 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| ||| |||| | |||||||||||||| |||| | |||||| | |||| || Sbjct 847971 AAAGCAAGCCCAAGCTCTGGATACATTAGCATGGGATAACATCATAGGATTT-CGGTCCT 847913 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||| ||||| | ||| || ||||||||||| ||||| ||||||||| | |||| Sbjct 847912 ATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTAT 847853 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || ||||||||| |||||||| ||||||| ||||| ||| ||||||||||| || Sbjct 847852 TTCATAGTCAGAGGTAAAATTCTTAGATTTATGAAAGACGAACCACTGCGAAAGCATTTG 847793 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| |||||||||||||| ||| ||||||| |||| Sbjct 847792 CCAAGGAAGTTTTCATTAATCA-AGAATGAAAGTTGGGGG 847754 >seq3668 Length=52152 Score = 77.0 bits (84), Expect = 6e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| ||| |||| | |||||||||||| Sbjct 23421 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCAAGCTCTGGATACATTAGCAT 23480 Query 131 GGAATAATAGAATAGGA 147 || |||| | |||||| Sbjct 23481 GGGATAACATCATAGGA 23497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915158385856