Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07]
4,547 sequences; 377,833,576 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq4216 87.8 2e-15
seq1822 87.8 2e-15
seq4406 77.0 3e-12
>seq4216
Length=163458
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 27397 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 27456
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 27457 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 27502
>seq1822
Length=5663
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 1062 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 1003
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 1002 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 957
>seq4406
Length=366957
Score = 77.0 bits (84), Expect = 3e-12
Identities = 82/107 (77%), Gaps = 1/107 (1%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| | ||||||||| |||||||||| ||| ||||| ||
Sbjct 312682 GGTCGCAGTGACCAGGCCCGGGTGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 312623
Query 107 AAGTGGACGTATAGGGTG-TGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| | ||| |||||||| |||||||||||| ||
Sbjct 312622 AAGACCATGTATGGGGGGCTGATGCCTGCCCAGTGCCGGAAGGTCAA 312576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476778997407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |