Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07] 4,547 sequences; 377,833,576 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq2822 475 1e-131 seq67 282 1e-73 seq246 266 1e-68 seq180 179 1e-42 seq446 165 2e-38 seq308 113 1e-22 seq4147 107 6e-21 seq258 87.8 5e-15 seq166 87.8 5e-15 seq4418 86.0 2e-14 seq4121 86.0 2e-14 seq351 82.4 2e-13 seq4113 80.6 8e-13 seq4466 75.2 3e-11 >seq2822 Length=12719 Score = 475 bits (526), Expect = 1e-131 Identities = 406/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 9951 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 10010 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| || |||| Sbjct 10011 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGTCGCGAATCCTC 10070 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 10071 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGATACAGGTGGTGCATGGCTGTCGTCAG 10128 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 10129 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 10188 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 10189 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 10248 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 10249 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 10308 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || |||| ||| || |||||||||||||| Sbjct 10309 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 10368 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 10369 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 10428 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 10429 CGGTGAATTCGTTCCCG 10445 >seq67 Length=580124 Score = 282 bits (312), Expect = 1e-73 Identities = 239/294 (81%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 158 AGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGA 217 ||||| ||||||||||||||||||||||| ||| || ||||||||||||||| |||||| Sbjct 226078 AGGTGGTGCATGGTTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCTACAACGA 226019 Query 218 GCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTG 277 |||||||||| | |||||||||| | || |||| || || || | |||||| |||| Sbjct 226018 GCGCAACCCTCGTGTTTAGTTGCCACCGTTGAGTTTGGAACCCTGAACAGACTGCTGGTG 225959 Query 278 ACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTAC 337 | || ||||||||||||| ||| |||||||| ||||||||||||||||| ||||| || Sbjct 225958 ATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGAC 225899 Query 338 ACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCAT 397 |||||||||||||||| | |||||||| |||| ||||||| ||| || |||| Sbjct 225898 ACACGTGCTACAATGGCCGGGACAAAGGGTCGCGATCCCGCGAGAGTGAGCTAACCCCAA 225839 Query 398 AAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAA 451 ||| || |||||||||||||| || |||||||||| || ||||||| |||| Sbjct 225838 AAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAA 225785 >seq246 Length=103002 Score = 266 bits (294), Expect = 1e-68 Identities = 354/496 (71%), Gaps = 47/496 (9%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| || ||| |||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 78826 TACGTTCGTAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGTGGTGGAGCAT 78885 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || |||||||||| |||| | |||||||||||||| ||| |||| ||| || | Sbjct 78886 GTTATTTAATTCGATGCAAAGAGAAGAACCTTACCAGGGCTTAACATGTCGTGAATCCCC 78945 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||| || | Sbjct 78946 TTGAAAGAGAGGGGTGCC-TTCGGGA---------ACGCG-GATACAGG----------- 78983 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||||||||| ||||||| | |||||||| Sbjct 78984 --------------TGTTGGGTTAAGTCCCGCAACGAGCACAACCCTCGTGTTTAGTTGC 79029 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || |||| ||| | || |||||| ||||| || | ||||||||||| ||| Sbjct 79030 CACCATTGAGT---GAACA-------GACTGCTGGTGATAAGCTGGAGGAAGGTGAGGAT 79079 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 ||||| || ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 79080 GACGTTAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 79139 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||| |||| ||| || ||| ||| ||| ||||||||| |||| Sbjct 79140 AAAGGGTCGCGATCCCGTGAGGGTGAGCTAACTCCAAAAACCTGTCCTCAGTTCGAATTG 79199 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 ||| ||||||||| || ||||||| || | |||||||||| | | || ||| | Sbjct 79200 TAGGCTGCAACTCCCCTGCATGAAGCCAGAGTTGCTAGTAATCACCGGTTAGCCATACGG 79259 Query 480 CGGTGAATACGTTCCC 495 | ||||| ||||||| Sbjct 79260 CCATGAATTCGTTCCC 79275 Score = 86.0 bits (94), Expect = 2e-14 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| || ||| |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 83688 TACGTTCGTAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGTGGAGCAT 83747 Query 61 GT-GGTTTAATTCGAAG 76 || |||| || | |||| Sbjct 83748 GTGGGTTGAAGTTGAAG 83764 >seq180 Length=614179 Score = 179 bits (198), Expect = 1e-42 Identities = 178/229 (78%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 40 CCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAAT 99 ||| |||||| |||||||||||||||||||||| | |||| |||||||||||| | ||| Sbjct 265731 CCCCCACAAGTGGTGGAGCATGTGGTTTAATTCCATGCAAAGCGAAGAACCTTGCTAAAG 265790 Query 100 CTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTT-------CGGGGGACAGA 152 |||||||| | || | | | || | ||||| | ||| || ||||||| | | Sbjct 265791 CTTGACATGTTGCGAATCTTTTTGAAAGAGAGGGT-CCCTTTGGGACAGCGGGGGATACA 265849 Query 153 GTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGC 212 ||| ||| ||||||| |||||||| ||| |||||| || |||||||||||||||||| Sbjct 265850 T--ACATGTGGTGCATGGCTGTCGTCAACTCATGTCGTAAGGTGTTGGGTTAAGTCCCGC 265907 Query 213 AACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCT 261 ||||||| |||| ||| | |||||||||| |||| |||| || || || Sbjct 265908 AACGAGCACAACTCTTGTGTTTAGTTGCCACCATTGAGTTTGGAACCCT 265956 >seq446 Length=532606 Score = 165 bits (182), Expect = 2e-38 Identities = 175/229 (76%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 268 ACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGA 327 |||||| |||| | || ||||||||| |||| | |||||| || |||| |||||||| Sbjct 399896 ACTGCCAGTGATATACTAGAGGAAGGTTGGGATGGCGTCAAGTCTGCATGGCCCTTATG- 399954 Query 328 TTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAG 387 || | ||||| ||||||||||| | ||||| ||| ||| || | | ||| || Sbjct 399955 ---GGCCCACACATATGCTACAATGGCAATTACAATGGGAAGCAAAGCTGTAAGGAGGAG 400011 Query 388 CAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCT 447 | ||||| | || |||| ||||||| |||||| ||||||||||| | |||||||| Sbjct 400012 CGAATCCGAAAAGGTTGC-CTCAGTTTGGATTGCTTTCTGCAACTCGGGAACATGAAGCT 400070 Query 448 GGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 |||||||||||||||| ||||||||||| ||||||||| || |||| Sbjct 400071 AGAATCGCTAGTAATCGAGGATCAGCATGCCGCGGTGAATATGTACCCG 400119 >seq308 Length=404284 Score = 113 bits (124), Expect = 1e-22 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| | ||||||||||||||| ||| Sbjct 88842 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCTCGCACAAGCGGTGGAACAT 88901 Query 61 GTGGTTTAATTCGAAGCAACGCGAA 85 |||||||||||||| |||| ||||| Sbjct 88902 GTGGTTTAATTCGATGCAAAGCGAA 88926 >seq4147 Length=132911 Score = 107 bits (118), Expect = 6e-21 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 189 GTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTA 248 || || | |||||||||||||||||| |||||||||||| | |||||||||| | | Sbjct 117211 GTAAGGTATTGGGTTAAGTCCCGCAATGAGCGCAACCCTCGTGTTTAGTTGCCACCGTAG 117270 Query 249 AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAA 308 |||| | | |||| ||| ||||||| || ||||||||| ||| ||| ||| |||| Sbjct 117271 AGTTTAGAGCCCTAAACAGACCACCGGTGATAAGCCGGAGGAATGTGAGGATGACTTCAA 117330 Query 309 ATCATCATGCCC 320 ||||||||||| Sbjct 117331 GTCATCATGCCC 117342 >seq258 Length=143676 Score = 87.8 bits (96), Expect = 5e-15 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 413 TCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG 472 |||||||| || |||||||||| || ||||||| ||||||||||||||||| | |||| Sbjct 94918 TCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAG 94859 Query 473 -CATGCTACGGTGAATACGTTCCCG 496 ||| | |||||||| |||||||| Sbjct 94858 CCATACGGCGGTGAATTCGTTCCCG 94834 >seq166 Length=411078 Score = 87.8 bits (96), Expect = 5e-15 Identities = 84/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 24 AAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCG 83 ||||||||||| ||||| ||| || | ||||||||||||||||||||| | |||| | | Sbjct 49322 AAGGAATTGACTGGGACTTGCATAATCTGTGGAGCATGTGGTTTAATTCAATGCAAAGTG 49263 Query 84 AAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGA 130 ||||||||| || ||||||||| | | ||||| || ||||| Sbjct 49262 AAGAACCTTTCC---GCTTGACATCTTGCGGATCCTCTTGAAATAGA 49219 >seq4418 Length=400948 Score = 86.0 bits (94), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 6/97 (6%) Strand=Plus/Plus Query 16 GAAACTCAAAGGAAT---TGACGGGGACCCGCACAAGCGGTGGAGCA--TGTGGTTTAAT 70 |||| |||||||||| |||||||| || | ||||||||||| ||| ||||||||||| Sbjct 58889 GAAATTCAAAGGAATAATTGACGGGG-CCTGTACAAGCGGTGGGGCACATGTGGTTTAAT 58947 Query 71 TCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||| ||||| | | |||||||||| |||||||| Sbjct 58948 TCGATACAACGAGCAAAACCTTACCAGCCCTTGACAT 58984 >seq4121 Length=124085 Score = 86.0 bits (94), Expect = 2e-14 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||| ||||||||||| ||||||||||| | || |||| | | |||||| Sbjct 51586 TACGTTCGCAAAAATGAAACTCAAAAAAATTGACGGGGGCTTGCTCAAGTGATTGAGCAT 51527 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 || | ||||||||| |||| | |||||||||||| | |||||||| Sbjct 51526 GTAG-TTAATTCGATGCAAAGTGAAGAACCTTACTAGGGCTTGACAT 51481 >seq351 Length=20270 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 15 TGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA 74 ||||| ||||||||||||| ||| | | |||||||||||||||||||||||||||| | Sbjct 11746 TGAAATTCAAAGGAATTGATAGGG-CTTGTACAAGCGGTGGAGCATGTGGTTTAATTCAA 11688 Query 75 AGCAACGCGAAGAACCTTACCA 96 |||| | | |||||||||| Sbjct 11687 TACAACATGCAAAACCTTACCA 11666 >seq4113 Length=175432 Score = 80.6 bits (88), Expect = 8e-13 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 15 TGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA 74 ||||||| |||||||||||| |||||| ||||| | |||||| | |||||||||| || Sbjct 39831 TGAAACTGAAAGGAATTGACAGGGACCAACACAAACAGTGGAG-AGTTGGTTTAATTTGA 39889 Query 75 AGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||| |||| |||| ||||| |||||||| Sbjct 39890 TGCAAAACGAAAAACC-TACCAGGGCTTGACAT 39921 >seq4466 Length=635863 Score = 75.2 bits (82), Expect = 3e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 407 CTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTA 466 ||||||| ||| || ||||||||| || | ||||||||||||||||||||||| | Sbjct 506871 CTCAGTTTGGACCGTTCTCTGCAACTTGAGAACATGAAGCTGGAATCGCTAGTAATGACA 506930 Query 467 GATCAGCATGC 477 ||||||||||| Sbjct 506931 GATCAGCATGC 506941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503931613120