Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07]
4,547 sequences; 377,833,576 total letters
Query= AAMG01001756.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq2403 98.7 2e-18
>seq2403
Length=204253
Score = 98.7 bits (108), Expect = 2e-18
Identities = 186/272 (68%), Gaps = 19/272 (7%)
Strand=Plus/Plus
Query 9 TGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGAGTCC 68
||||||||||||||||| || || || ||| |||| |||||| |||| | ||||
Sbjct 65893 TGTCCTAGGGCATGTGTCGGTGTTGGGAAAGATGGGAATTTGGTTAATTGGAGCGAGTTG 65952
Query 69 GACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGAC--CT-TGGTT 125
||| || || ||| ||||| || | ||||| | || || ||| || | ||
Sbjct 65953 GACTCGGCGGTGCGAGTTGGAGCGTGTGCCGTGGAATTGGGAAATCAGACGACTCTTGTG 66012
Query 126 ACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAAG 185
|| || | || || || |||||||| |||||||| | || |||
Sbjct 66013 ACTGGAGTGACATACCAGGGAGCCCCACAAGGGTTCTTTCTGGTG--------CAA---- 66060
Query 186 GATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTG 245
||||||||| |||||||| | ||| ||||||||||| || |||||||| |||||
Sbjct 66061 ---GGGCAAAATGGTAAATTGGAGAGGATCGATGTTCCTGACGAGTTTTCTGGGTTTGTT 66117
Query 246 CAATCTGGATGCTGTGTGGAGATCTGA-AATT 276
|| || || |||| ||| ||||| ||| ||||
Sbjct 66118 CAGTCGGGTTGCTCTGTTGAGATTTGAGAATT 66149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918358240352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |