Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07] 4,547 sequences; 377,833,576 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3540 132 9e-29 seq464 122 2e-25 seq1992 78.8 2e-12 >seq3540 Length=41857 Score = 132 bits (146), Expect = 9e-29 Identities = 88/98 (90%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| |||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||| Sbjct 14903 GTGATGGGGATAGATCATTGCAAGTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGA 14844 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| | |||||||| ||||||||||||||||||| Sbjct 14843 GTCATCAACTCGCGTTGACTACGTCCCTGCCCTTTGTA 14806 >seq464 Length=1457561 Score = 122 bits (134), Expect = 2e-25 Identities = 99/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 209 GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 268 ||||||| | ||| | | ||||| | |||||||| ||||| |||| ||| |||||||| Sbjct 847658 GGTAATCCTCGAAAATTTTATCGTGATAGGGATAGATCATTGTAATTGTTGGTCTTCAAC 847599 Query 269 GAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||||| | ||||||||| || ||||| || |||| ||||||||||| Sbjct 847598 GAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGTGTTGACTATGTCCTTGCCCTTTGTA 847539 >seq1992 Length=187634 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGC 160 ||||||||||||||| |||| || ||| ||||||||| ||||||||||| |||||||| Sbjct 50695 GGAAGTTTGAGGCAACAACATGTATGTAATGCCCTTAAATGTTCTGGGCTGCACGCGC 50752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947156930816