Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07]
4,547 sequences; 377,833,576 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq446 700 0.0
seq380 143 9e-32
>seq446
Length=532606
Score = 700 bits (776), Expect = 0.0
Identities = 479/536 (89%), Gaps = 9/536 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 322885 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 322944
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 322945 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 323004
Query 127 GGCCCGCGAAGGA---CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
||||||| ||| |||| ||| || || || || | || | |||| |||
Sbjct 323005 GGCCCGCCGAGGCGGGCCTTGGGTCCAAAAGGAGG--GGCGATGCCCCGCCTCCGGCTCA 323062
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTC 239
|| ||||||||| |||| ||| ||||||||||||||| | ||||| | |||||||
Sbjct 323063 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACCTTCGCCGCCGAGACGGCTC 323122
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323123 CCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 323182
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 323183 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATA 323242
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323243 GTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 323302
Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323303 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 323362
Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 323363 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 323418
>seq380
Length=253514
Score = 143 bits (158), Expect = 9e-32
Identities = 108/127 (85%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| | ||||||||||||| |||| | ||||| ||||||| |||||
Sbjct 200521 CTTTTGTTCTACACGGGATTTCTGTTCTCGTTGAGCTCATCTTAGAACACCTGTGTTATC 200580
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct 200581 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCTGCCTAGATT 200640
Query 127 GGCCCGC 133
|||||||
Sbjct 200641 GGCCCGC 200647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635125647456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |