Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macleaya_20cordata_20[genbank_20GCA_5F002174775.1_202017-06-07] 4,547 sequences; 377,833,576 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq446 700 0.0 seq380 143 9e-32 >seq446 Length=532606 Score = 700 bits (776), Expect = 0.0 Identities = 479/536 (89%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 322885 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 322944 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 322945 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 323004 Query 127 GGCCCGCGAAGGA---CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 ||||||| ||| |||| ||| || || || || | || | |||| ||| Sbjct 323005 GGCCCGCCGAGGCGGGCCTTGGGTCCAAAAGGAGG--GGCGATGCCCCGCCTCCGGCTCA 323062 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTC 239 || ||||||||| |||| ||| ||||||||||||||| | ||||| | ||||||| Sbjct 323063 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACCTTCGCCGCCGAGACGGCTC 323122 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323123 CCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 323182 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 323183 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATA 323242 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323243 GTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 323302 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323303 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 323362 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 323363 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 323418 >seq380 Length=253514 Score = 143 bits (158), Expect = 9e-32 Identities = 108/127 (85%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| | ||||||||||||| |||| | ||||| ||||||| ||||| Sbjct 200521 CTTTTGTTCTACACGGGATTTCTGTTCTCGTTGAGCTCATCTTAGAACACCTGTGTTATC 200580 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct 200581 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCTGCCTAGATT 200640 Query 127 GGCCCGC 133 ||||||| Sbjct 200641 GGCCCGC 200647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635125647456