Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7 140 2e-31 seq1149 134 8e-30 seq982 134 8e-30 seq625 134 8e-30 seq435 134 8e-30 seq232 134 8e-30 seq111 134 8e-30 seq4 134 8e-30 seq673 87.8 1e-15 seq102 86.0 3e-15 >seq7 Length=26383534 Score = 140 bits (154), Expect = 2e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 19444512 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 19444571 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct 19444572 GATCCCTGGTCGGCATCGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTCGA 19444628 >seq1149 Length=312252 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 175785 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 175726 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 175725 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 175669 >seq982 Length=3776313 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 261947 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 262006 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 262007 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 262063 >seq625 Length=5148542 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 232427 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 232486 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 232487 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 232543 >seq435 Length=330949 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 129242 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 129183 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 129182 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 129126 >seq232 Length=8559335 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 8311836 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 8311777 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 8311776 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 8311720 >seq111 Length=1131199 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 231213 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 231272 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 231273 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 231329 >seq4 Length=23020739 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 21905028 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 21905087 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 21905088 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 21905144 >seq673 Length=4704030 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCA-AAATGATAACATCGCCCGATCC 65 || ||||| ||||||| ||||||| | |||| | || ||||| ||| || |||||| Sbjct 1434213 AAAACTTTAATTTCTCATAAGGTGTC-AGCGGARTCCTAAATG-TAAYATTCGTCGATCC 1434156 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||| ||| ||||| |||| |||||| || ||||||||||||||||||| Sbjct 1434155 CTGGTCAACATCGTTTATGGTTGAGACTAGGATGGTATCTGATCGTCTTCGA 1434104 >seq102 Length=1604085 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 50 TAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109 ||| ||| ||||||||| |||||||| ||||| |||| |||||| |||||||||||||| Sbjct 1394275 TAAMATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATC 1394216 Query 110 GTCTTCGA 117 || ||||| Sbjct 1394215 GTYTTCGA 1394208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396734890