Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq625 412 6e-113 seq501 412 6e-113 seq430 412 6e-113 seq179 412 6e-113 seq2 408 7e-112 seq341 351 2e-94 seq249 196 8e-48 seq749 134 2e-29 seq1140 122 1e-25 seq10 93.3 7e-17 >seq625 Length=5148542 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 228108 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 228166 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 228167 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 228226 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228227 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 228286 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 228287 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 228346 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 228347 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 228399 >seq501 Length=1008263 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 919472 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 919530 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 919531 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 919590 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 919591 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 919650 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 919651 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 919710 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 919711 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 919763 >seq430 Length=2329875 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || | ||||||||||||||||||||||||||||||| Sbjct 2164506 TACTAGGTTGAATTACTATTGCGACG-CTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 2164448 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 2164447 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 2164388 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2164387 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 2164328 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 2164327 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 2164268 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 2164267 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 2164215 >seq179 Length=736049 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 544223 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 544165 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 544164 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 544105 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544104 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 544045 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 544044 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 543985 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 543984 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 543932 >seq2 Length=36374806 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||| ||||||| Sbjct 11117325 TACTAGGTTGAATTACTATTGTGAC-ACTGTCATCAGTAGGGTAAAACTAACTTGTCTCA 11117383 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 11117384 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 11117443 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11117444 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 11117503 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 11117504 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 11117563 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 11117564 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 11117616 Score = 302 bits (334), Expect = 8e-80 Identities = 227/267 (85%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 || |||||||||| |||||||||||||| ||||| ||||||||||||||| ||||| ||| Sbjct 32963556 ACTGTCATCAGTATGGTAAAACTAACCTATCTCACGACGGTCTAAACCCAACTCACATTC 32963615 Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 |||||| |||||||||||||| ||| ||| |||||||| ||| |||||||||| || Sbjct 32963616 CCTATTGGTGGGTGAACAATCTAACACTTGGTGAATTCTGATTCACAATGATAGGAAAAG 32963675 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 32963676 CCGATAGCGAAGGATAAAAAAACAACGTCGCTATGAACGCTTGGTTGCCACAAGCCAGTT 32963735 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 | | ||||||||||||||| ||||| |||| ||||||| || || ||| |||||||| Sbjct 32963736 ACCTATGTGGTAACTTTTCTAACACCTATAGCTTCAAATTCTGAAGGTCTACAGGATCGA 32963795 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| | |||| || |||||| Sbjct 32963796 TAGGCCACGCCTTCACAATTCGTATTC 32963822 >seq341 Length=1191817 Score = 351 bits (388), Expect = 2e-94 Identities = 251/292 (86%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 2 ACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 |||| | ||||||| ||| | | | ||||||||||||||||||||| | ||||||| Sbjct 370501 ACTAGGTTGAATTACTATTACGAC-ATTGTCATCAGTAGGGTAAAACTATCATGTCTCAC 370559 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 | |||||| |||| |||||||||| |||| |||||||||||||||||| ||| ||| Sbjct 370560 GGCGGTCTWAACCYTRCTCACGTTCCTTATTTGTGGGTGAACAATCCAACACTTGGTGAA 370619 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 ||||||||| |||||| ||||| || |||||||||||||||||||||||||| ||||| Sbjct 370620 TTCTGCTTCACAATGATAAGAAGAACCAACATCGAAGGATCAAAAAGCAACGTCTCTATG 370679 Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 |||||||||| |||||||||||||||| ||||| |||||||||||| |||||||||| || Sbjct 370680 AACGCTTGGCYGCCACAAGCCAGTTATYCCTGTKGTAACTTTTCTGACACCTCTAGCTTC 370739 Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | || |||||||||||||||||||| ||||||||||| |||||| Sbjct 370740 AAATTTCRAAGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATTC 370791 >seq249 Length=4729507 Score = 196 bits (216), Expect = 8e-48 Identities = 141/163 (87%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| |||||||||||||||||||||||| || ||||| |||||||| | Sbjct 1646827 GAATTCTGCTTCATAATGATAGGAAGAGCCGACATCGAATAATAAAAAAACAACGTCGTT 1646886 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||| | Sbjct 1646887 ATGAACGCTTGATTGCCACAAGCCAGTTATCCTTGTGGTAACTTTCCTGACACCTCTAAC 1646946 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 ||||||||| | || | ||| ||||||||||||| |||||| Sbjct 1646947 TTCAAATTTCAAAGGTTTGAAGCATCGATAGGCCACGCTTTCA 1646989 Score = 172 bits (190), Expect = 9e-41 Identities = 128/147 (87%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGA-CATCGAAGGAT-CAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 ||||||| |||| | |||||||| || ||||||||||| ||||||||||| |||| |||| Sbjct 1630632 ATAGGAAAAGCCCAACATCGAAGAATTCAAAAAGCAACATCGCTATGAACACTTGACTGC 1630691 Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254 ||||||||||||||||||||||||||||| ||| |||||||| | ||||||| ||| || Sbjct 1630692 CACAAGCCAGTTATCCCTGTGGTAACTTTCCTGACACCTCTAACTTCAAATTCCGAAGGT 1630751 Query 255 CTAAAGGATCGATAGGCCACACTTTCA 281 | ||| ||||||||||||| |||||| Sbjct 1630752 TTGAAGCATCGATAGGCCACGCTTTCA 1630778 >seq749 Length=8889691 Score = 134 bits (148), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 ||||||||||| ||||||||| ||| |||||||||||||| || |||| |||||||| Sbjct 913982 AAAAGCAACGTAGCTATGAACACTTAGCTGCCACAAGCCA----TCTCTGTTGTAACTTT 913927 Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 | || |||||||| ||||||| | | || |||| |||||||||||| || |||||||| Sbjct 913926 TTTGATACCTCTAGTTTCAAATTCCAAAGGTCTAATGGATCGATAGGCTACGCTTTCATG 913867 Query 284 GTTTGTATTC 293 ||| |||||| Sbjct 913866 GTTCGTATTC 913857 >seq1140 Length=8567921 Score = 122 bits (134), Expect = 1e-25 Identities = 102/125 (82%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 ||||||||||||||||||||| ||| ||| ||||||| || || |||| |||||||| Sbjct 857214 AAAAGCAACGTCGCTATGAACACTTAGCTACCACAAGTCA----TCTCTGTTGTAACTTT 857159 Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 | || ||||||||| | ||||| | | || |||| ||||||||||| ||| |||| ||| Sbjct 857158 TTTGACACCTCTAGTTTTAAATTCCAAAGGTCTAATGGATCGATAGGTCACGCTTTAATG 857099 Query 284 GTTTG 288 ||||| Sbjct 857098 GTTTG 857094 >seq10 Length=33391235 Score = 93.3 bits (102), Expect = 7e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || |||||||||||||||||||||| | | ||| Sbjct 7101533 TACTAGGTTGAATTACTATTGCAAC-ACAATCATCAGTAGGGTAAAACTAACTTATTTCA 7101591 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 || |||||||||||||||| |||||||||| ||||| Sbjct 7101592 CGAACGTCTAAACCCAGCTCATGTTCCCTATTGGTGGG 7101629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854389311456