Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 7e-15 seq1149 84.2 3e-14 seq1140 84.2 3e-14 seq982 84.2 3e-14 seq625 84.2 3e-14 seq435 84.2 3e-14 seq379 84.2 3e-14 seq280 84.2 3e-14 seq232 84.2 3e-14 seq111 84.2 3e-14 seq7 84.2 3e-14 seq749 77.0 4e-12 >seq4 Length=23020739 Score = 86.0 bits (94), Expect = 7e-15 Identities = 80/99 (81%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 CCAACA-AAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||| ||||||| || | |||||| | |||| |||||||||||||||| | |||| Sbjct 21905301 CCAACAGAAATAGGACCGAAAATCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGT 21905360 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | || |||||||| ||||||||||| |||| |||| || Sbjct 21905361 AGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 21905399 >seq1149 Length=312252 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 175518 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 175460 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 175459 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 175422 >seq1140 Length=8567921 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 6153506 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 6153448 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 6153447 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 6153410 Score = 77.0 bits (84), Expect = 4e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | |||| |||||||||||||||| | ||||| || |||||||| |||||||| Sbjct 4813455 TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTAGGCTTGCTTTGAGCACTCTAA 4813514 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 4813515 TTTCTTCAAAGTAACAG 4813531 >seq982 Length=3776313 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 262214 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 262272 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 262273 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 262310 >seq625 Length=5148542 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 232694 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 232752 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 232753 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 232790 >seq435 Length=330949 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 128975 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 128917 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 128916 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 128879 >seq379 Length=9387712 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 2042405 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 2042347 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2042346 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2042309 >seq280 Length=5483639 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 2361516 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 2361574 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2361575 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2361612 >seq232 Length=8559335 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 8311569 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 8311511 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 8311510 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8311473 >seq111 Length=1131199 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 231480 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 231538 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 231539 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 231576 >seq7 Length=26383534 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 19444779 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 19444837 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 19444838 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 19444875 >seq749 Length=8889691 Score = 77.0 bits (84), Expect = 4e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | |||| |||||||||||||||| | ||||| || |||||||| |||||||| Sbjct 4870414 TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTAGGCTTGCTTTGAGCACTCTAA 4870473 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 4870474 TTTCTTCAAAGTAACAG 4870490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192786734