Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1171 114 7e-24 seq7 113 3e-23 >seq1171 Length=10373 Score = 114 bits (126), Expect = 7e-24 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 ||||||||| |||||||||||| |||||||||| ||||| || |||||| | | Sbjct 3346 AACCCAAAGCCTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCTG 3287 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| |||| |||| |||||| || ||||||||||||||||||| Sbjct 3286 ATCCCTGGTCGGCATCATTTATGGTTGAGACTAGGATGGTATCTGATCGTCTTCGA 3231 >seq7 Length=27069033 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||| ||||||||||| ||| |||||| ||||| || |||||| || Sbjct 13779704 GAACCCAAAGATTTTGATTTCTCATAAAGTGCCGGCAGAGTCCTAAAAGCAACATCCGCC 13779763 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||| |||| ||| ||||| |||| |||||| |||||||||||| ||||||||| Sbjct 13779764 GATTCCTGGTCGACATCGTTTATGGTTGAGACTAGGACGGTATCTGACCGTCTTCGA 13779820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278394730410