Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1171 114 7e-24
seq7 113 3e-23
>seq1171
Length=10373
Score = 114 bits (126), Expect = 7e-24
Identities = 95/116 (82%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61
||||||||| |||||||||||| |||||||||| ||||| || |||||| | |
Sbjct 3346 AACCCAAAGCCTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCTG 3287
Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||| |||||||| |||| |||| |||||| || |||||||||||||||||||
Sbjct 3286 ATCCCTGGTCGGCATCATTTATGGTTGAGACTAGGATGGTATCTGATCGTCTTCGA 3231
>seq7
Length=27069033
Score = 113 bits (124), Expect = 3e-23
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||| ||||||||||| ||| |||||| ||||| || |||||| ||
Sbjct 13779704 GAACCCAAAGATTTTGATTTCTCATAAAGTGCCGGCAGAGTCCTAAAAGCAACATCCGCC 13779763
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| ||| |||| ||| ||||| |||| |||||| |||||||||||| |||||||||
Sbjct 13779764 GATTCCTGGTCGACATCGTTTATGGTTGAGACTAGGACGGTATCTGACCGTCTTCGA 13779820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278394730410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |