Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 2e-26
>seq2
Length=32417782
Score = 125 bits (138), Expect = 2e-26
Identities = 224/326 (69%), Gaps = 1/326 (0%)
Strand=Plus/Minus
Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71
|||||||| | ||||| || ||| |||||||| || |||| ||| |||||||||||
Sbjct 18982380 AATAAGCATCAGCTAAATATGTGTTAGCAGCCGTAGTGATACAGAGGATGCAAGCGTTAT 18982321
Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131
| |||| ||||||||||| || | ||| || | | |||| | | |||||||
Sbjct 18982320 CCAGAATGGTTGGGCGTAAAGTGTTTGTAGGTGGCTTTTTAAGTTCGCCATCAAATCCCA 18982261
Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGG 191
|||| |||| ||| | | | | ||| ||||||||| || || | |
Sbjct 18982260 AGGCTCAACCCTGGACAGGTGATGGAAATTGCCAAGCTAGAGTGTAGTAGGGGCAGAGAG 18982201
Query 192 AATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAG 251
|||| | ||| ||| || ||||||||||| || || | ||||||||||||| || |||
Sbjct 18982200 AATTTCCGGTGGAGCGGTAAAATGCGTAGAGATTTGAAAGAACACCAATGGCAAAAGCA- 18982142
Query 252 CCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 311
| || || ||||||||| || | | |||| | |||||| || ||||| ||||
Sbjct 18982141 CACCAACGGTCAACACTGACACTGAAAGAGGAAAACTAGGGGAGTGAATGGGATTGGATA 18982082
Query 312 CCCTGGTAGTCCACGCCCTAAACGAT 337
| |||||| ||| ||||||||
Sbjct 18982081 TTATAGTAGTCTTAGCCGTAAACGAT 18982056
Score = 102 bits (112), Expect = 2e-19
Identities = 219/326 (67%), Gaps = 1/326 (0%)
Strand=Plus/Minus
Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71
|||||||| || |||| | |||||| | ||| |||||| ||| |||||| ||||
Sbjct 19036744 AATAAGCATCGACTAATTCTGTGCCAATAACCGTAGTAATATAGAGGATGCAAGTGTTAT 19036685
Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131
| |||| |||||||||||| | | | | || | | ||| | | | |||||||
Sbjct 19036684 CCAGAATGGTTGGGCGTAAAGCATCTGTATGTGGCTTTTCAAGTCTGCCATCAAATCCCA 19036625
Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGG 191
|||| |||| ||| | | | | ||| ||||||| || || || ||
Sbjct 19036624 AGGCTCAACCCTGGACAGACGGTGGAAATTGCCAAGCTAGAGTACAGTAGGGGTGGAGGG 19036565
Query 192 AATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAG 251
|||| | || |||||| |||||| |||| || | | ||||||||||||| || |||
Sbjct 19036564 AATTTCTGATGGAGCAGTAAAATGCATAGAGATCTAAAAGAACACCAATGGCTAAAGCA- 19036506
Query 252 CCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 311
| || || |||| |||| | | ||| |||| |||||| || ||||||||||
Sbjct 19036505 CACCAATGGTCAACATTGACATTGAGAGACGGAAGCTAGGGGAGTGAATGGGATTAGATA 19036446
Query 312 CCCTGGTAGTCCACGCCCTAAACGAT 337
| | |||||| ||| ||||||||
Sbjct 19036445 CTGTAGTAGTCGTAGCCGTAAACGAT 19036420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289573962976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |