Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 1e-15
seq1 77.0 8e-12
>seq3
Length=29412403
Score = 89.7 bits (98), Expect = 1e-15
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71
|||||||||||| || | |||||| ||| ||| | ||||||||||| ||| |
Sbjct 19148155 TGCATCTTCACATATATGTATATTTCATCGAGCCTCTTTTTGAGACAGCGCCCAGATCAT 19148096
Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
|| || |||||| | || ||||||| ||| ||||||||| |||| ||||||||| ||
Sbjct 19148095 TATACCTTTCGTGTGGATCAAAACTTACTCGATAAGGAATTTTGCTATCTTAGGACCATT 19148036
Query 132 ATTGTTA 138
|| ||||
Sbjct 19148035 ATAGTTA 19148029
>seq1
Length=34959721
Score = 77.0 bits (84), Expect = 8e-12
Identities = 71/90 (79%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || |||| || |||||||| ||||| |||
Sbjct 1102960 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTACCGAGTTCCTTAGAGAGAGTTGTCT 1103019
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 1103020 CGCGCCCCTAGGTATTCTCTACCTACCCAC 1103049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260774544448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |