Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq13 138 2e-30 seq632 107 4e-21 >seq13 Length=28119335 Score = 138 bits (152), Expect = 2e-30 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||| | |||| | |||||| ||||||| |||||| ||| ||||||||||| Sbjct 6966495 GGGACAATCTCAGGTAGACAGTTTCTGTGGGGCGTAGGCCTCCTAAAAGGTAACGGAGGC 6966554 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | | || ||| ||| | || | | | |||||||||| || || Sbjct 6966555 GTGCAAAGGTTTCTTCGAGGAGGACGGAGATTG-GCCCTCTAATGCAAAGGCAGAAAGGA 6966613 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 |||||||||| | | || | ||| |||| ||| ||||||||| |||| ||||||| ||| Sbjct 6966614 GTTTGACTGCAAGAACCACCTGTCGAGCAAGGATGAAAGTCGGCCTTAGTGATCCGACGG 6966673 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| || || | |||| Sbjct 6966674 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTATTCTAGAGATA 6966723 >seq632 Length=17794 Score = 107 bits (118), Expect = 4e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 |||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||||| || Sbjct 10238 CTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGA 10179 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||| ||||||||||| |||||| |||| || || |||||| Sbjct 10178 GTGGAAGGGCCGTCGCTCAACGGATCAAAGTAACTCTAGGGATA 10135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982380165344