Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq7 141 1e-31 >seq7 Length=27069033 Score = 141 bits (156), Expect = 1e-31 Identities = 143/182 (79%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCA 68 ||| |||||||||| ||||||||| |||||||||| | || ||||| |||||||| || Sbjct 13780068 ACTGTTACTTTGAAGAAATTAGAGTGTTCAAAGCAAGTCTACGCTCGGTATACATTAGCA 13780009 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 | | |||| | |||||| | |||| ||||||||| || | ||| || |||||| Sbjct 13780008 TAGGATAACATCATAGGATTT-CGGTCCTATTTTGTTGGCCTTCGGGATCGGA-GTAATG 13779951 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||||||||||||| | ||||| || |||||||||||||||||||||||| Sbjct 13779950 ATTAACAGGGATAGTCGGGGGCATTTGTATTTCATAGTCAAAGGTGAAATTCTTGGATTT 13779891 Query 189 AT 190 || Sbjct 13779890 AT 13779889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511989985760