Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 1e-31
>seq7
Length=27069033
Score = 141 bits (156), Expect = 1e-31
Identities = 143/182 (79%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCA 68
||| |||||||||| ||||||||| |||||||||| | || ||||| |||||||| ||
Sbjct 13780068 ACTGTTACTTTGAAGAAATTAGAGTGTTCAAAGCAAGTCTACGCTCGGTATACATTAGCA 13780009
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
| | |||| | |||||| | |||| ||||||||| || | ||| || ||||||
Sbjct 13780008 TAGGATAACATCATAGGATTT-CGGTCCTATTTTGTTGGCCTTCGGGATCGGA-GTAATG 13779951
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| || | ||||||||||||| | ||||| || ||||||||||||||||||||||||
Sbjct 13779950 ATTAACAGGGATAGTCGGGGGCATTTGTATTTCATAGTCAAAGGTGAAATTCTTGGATTT 13779891
Query 189 AT 190
||
Sbjct 13779890 AT 13779889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511989985760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |