Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq7 464 2e-128
seq1171 414 3e-113
seq485 349 1e-93
seq17 300 5e-79
seq5 156 1e-35
seq6 123 8e-26
seq221 116 1e-23
seq239 80.6 8e-13
>seq7
Length=27069033
Score = 464 bits (514), Expect = 2e-128
Identities = 374/443 (84%), Gaps = 8/443 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||| ||||||| |||| | || |||||| |||| | ||||||||||||||||||
Sbjct 13780291 GTACTCATTTCAATTACCAGACTCGAA-GAGCCCGGTATTATTATTTATTGTCACTACCT 13780349
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 13780350 CCCCGTGTTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGTCGTT 13780409
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||| | || ||||||
Sbjct 13780410 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCATCACCACTATGGTA 13780469
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||||||||||||||||||||||||||||||||| | | ||| ||
Sbjct 13780470 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTTGCCTGCA 13780529
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGA--GCCCCGA-AGGGCG 295
| | |||| || ||| ||| |||||| |||||||| || || | | | || ||
Sbjct 13780530 CGATGGCCGTGAGATCCGTCGAGTTATCATGAATCATCATAGCAATGGGCTGAGCCCGCA 13780589
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || |||||| ||||||| ||||| | | | |||||||
Sbjct 13780590 TCGACCTTTTATCTAATAAATGCATTCCTTCCAGAAGTCGAGGTTTGTTGAACGTATTAG 13780649
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| ||||||||||| |||| || ||| |||||| |||| ||||||||||
Sbjct 13780650 CTCTAGAATTACTACGGTTATCCAAGTAG-CAGATACCATCAAACAAACTATAACTGATT 13780708
Query 415 TAATGAGCCATTCGCAGTTTCAC 437
|||||||||||||||||||||||
Sbjct 13780709 TAATGAGCCATTCGCAGTTTCAC 13780731
>seq1171
Length=10373
Score = 414 bits (458), Expect = 3e-113
Identities = 398/501 (79%), Gaps = 11/501 (2%)
Strand=Plus/Minus
Query 12 AATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGG 71
|||||| |||| | || || ||| ||| |||||||| |||||||||||| || | |
Sbjct 2759 AATTACCAGACTCGAA-GAACCCGATATTGTTATTTATTATCACTACCTCCCTGTATTAG 2701
Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131
| || |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct 2700 GTTTTGGTAATTTGCGCACCTGCTGCCTTCCTTGGATGTGGTGGCCATTTCTCAGGCTCC 2641
Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA-TACCATGGTAGGCCACTATC 190
| || | ||||| ||||||||| | ||| |||| | | ||||||||||||| |||||
Sbjct 2640 CCCTTCAGAATCAAACCCTAATCCTTCGTGACCCCATCACCACCATGGTAGGCCTCTATC 2581
Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAGGCCAT 249
|||||||||||||||||| |||||||||||||||||| |||| ||| | | ||| ||
Sbjct 2580 CTACCATCGAAAGTTGATGGGGCAGAAATTTGAATGATGCATCACCGACAAGATGGCTAT 2521
Query 250 GCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGG----CGTTGGTTTTTT 305
||||| | | |||||| |||||||| | | | | || | ||| | ||||
Sbjct 2520 GCGATCCATGGAGTTATCATGAATCATTAGAGTAACGGGTAGAGCCCACGTCGACCTTTT 2461
Query 306 ATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364
||||||||||| || |||||| |||||| ||||| ||| ||||| |||||| |||
Sbjct 2460 ATCTAATAAATGCATTCCTTCCAGAAGTCAAAATTTTTTGCACATATTAACTCTAG-ATT 2402
Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424
|| ||||||||| |||| || ||| || ||| |||| |||||| |||||||||||||
Sbjct 2401 ACTACGGTTATCTGAGTAG-CAGATACCATTAAACAAACTATAACTAATTTAATGAGCCA 2343
Query 425 TTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483
||||||||||||| || | ||| | | ||||||| ||||| |||||||||| |||||||
Sbjct 2342 TTCGCAGTTTCACAGTTTGAATTAGTTCATACTTACACATGTATGGCTTAATTTTTGAGA 2283
Query 484 CAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||
Sbjct 2282 CAAGCATATGACTACTGGCAG 2262
>seq485
Length=25194
Score = 349 bits (386), Expect = 1e-93
Identities = 289/348 (83%), Gaps = 10/348 (3%)
Strand=Plus/Minus
Query 27 AAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGC 86
|||| ||| | || |||||||||||||||| ||| |||||| ||||||||||||||||
Sbjct 9379 AAGACCCCGGGATTGTTATTTATTGTCACTACTTCCTCGTGTCAGGATTGGGTAATTTGC 9320
Query 87 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146
|||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||
Sbjct 9319 ACGCCTGCTGCCTTCCTTGAATGTGGTAGCCGTTTCTCAAGCTCCCTCTCCGAAATCAAA 9260
Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTG 206
||||||||| || | |||||| ||||||||||||| |||| ||| |||||||||||
Sbjct 9259 CCCTAATTCTCCATCACCCGTCACCACCATGGTAGGCCTCTATTCTATTATCGAAAGTTG 9200
Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTTA 265
||||||||||||||||||||| | |||||||| | | |||| |||||| ||| |||||
Sbjct 9199 ATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGATGGCCGTGCGATCCGTCGAGTTA 9140
Query 266 TTATGAATCACCAAGGAGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATAAATACA 319
| |||||||| || |||| | | || |||| | ||||||||||||||| ||
Sbjct 9139 TCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCA 9082
Query 320 CCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366
||||||| ||||||||||||| | ||| |||||||||||||||||||
Sbjct 9081 TCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTAC 9034
>seq17
Length=27373735
Score = 300 bits (332), Expect = 5e-79
Identities = 372/508 (73%), Gaps = 46/508 (9%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||| ||| | || |||| ||||| |||| | ||||||||||||||||||
Sbjct 6844912 GTACTCATTCCAGTTATCAAACTCAAA-GAGCCTAGTATTATTATTTATTGTCACTACCT 6844854
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||| |||||||||| ||||| | || ||||||||||| | | |||||| | ||
Sbjct 6844853 TCCCGTGTCTAGATTGGGTAAATTGCGTGTCTACTGCCTTCCTTAGCTATGGTAGTCATT 6844794
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||| ||| |||| |||||| |||| |||||| || | |||| | || |||| |
Sbjct 6844793 TCTCAAGCT--CTCTTTGGAATCAAACCGTAATTCTCCATCACCCATCACCACTATGGAA 6844736
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||| ||||||||| ||| | |||||||||||| | || || ||
Sbjct 6844735 GGCCTCTATCCTACCATCAAAAGTTGATGGGGTAAAAATTTGAATGATACGTCACCAGCA 6844676
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
| | |||| ||| || ||| |||||| |||||||| ||| |||| || |
Sbjct 6844675 CGATGGCCTTGCAATCCGTCGAGTTATCATGAATCATCAA--AGCC------TGCATCAA 6844624
Query 300 TTTTTTATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358
|||||||| |||||| || |||||| ||||| ||| ||||| ||| |||||||||||
Sbjct 6844623 ACTTTTATCTGATAAATGCATCCCTTCTAGAAGTTGGGATTTTTTGCACGTATTAGCTCT 6844564
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
|||||||| | | |||| |||| | |||| |
Sbjct 6844563 AGAATTACTATGATTATTTGAGTAGCA------------------GATACC--------- 6844531
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477
|||||| || |||||| | | ||| | | ||||||| ||||||||||||||||||
Sbjct 6844530 ---CCATTCACAATTTCACAATCTGAATTAGTTCATACTTACACATGCATGGCTTAATCT 6844474
Query 478 TT--GAGACAAGCATATGACTACTGGCA 503
|| |||||||||||||||||||| |||
Sbjct 6844473 TTGAGAGACAAGCATATGACTACTAGCA 6844446
>seq5
Length=28438989
Score = 156 bits (172), Expect = 1e-35
Identities = 113/131 (86%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTA 114
|||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 24316940 CTACCTCCTCGTGTCAGGATTGGATAATTTGCGCGCCTGCTGCCTTTTTTGGATGTGGTA 24316881
Query 115 GCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACC 174
||| |||||||| |||||||| ||||| |||||||||||| |||| |||| | |||
Sbjct 24316880 GCCATTTCTCAGACTCCCTCTATGGAATTGAACCCTAATTCTCCGTCACCCATCACCACC 24316821
Query 175 ATGGTAGGCCA 185
||| |||||||
Sbjct 24316820 ATGATAGGCCA 24316810
>seq6
Length=27939960
Score = 123 bits (136), Expect = 8e-26
Identities = 91/105 (87%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445
|| ||| |||||| |||| |||||||||||||||||||||||| |||||||| | | |
Sbjct 2852505 AGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGTAGTTTCACAATCTGAA 2852564
Query 446 TT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
|| | | ||||||| ||||||||||||||||||||||||||||||
Sbjct 2852565 TTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCA 2852609
>seq221
Length=79079
Score = 116 bits (128), Expect = 1e-23
Identities = 102/125 (82%), Gaps = 3/125 (2%)
Strand=Plus/Plus
Query 377 CATGTAGTAAGGTA--CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434
||| |||||| ||| |||| |||||||| ||| ||||||||||||| ||||||||||||
Sbjct 48504 CATATAGTAACGTATACTATAAAATAAACTATAGCTGATTTAATGAGTCATTCGCAGTTT 48563
Query 435 CACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493
|| ||| | ||| | ||||| ||| ||| ||| ||| |||||||||||||||||||
Sbjct 48564 CAATGTCTGAATTAGTTTATATTTACACACATGTGGATTAGTCTTTGAGACAAGCATATG 48623
Query 494 ACTAC 498
|| ||
Sbjct 48624 ACAAC 48628
>seq239
Length=74847
Score = 80.6 bits (88), Expect = 8e-13
Identities = 60/69 (87%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || ||||| |||| ||||||||||||||||||
Sbjct 16068 GTACTCATTCCAATTACCAGACTCGAA-GAGCCTAGTATTGTTATTTATTGTCACTACCT 16126
Query 61 CCCCGTGTC 69
|||||||||
Sbjct 16127 CCCCGTGTC 16135
Score = 80.6 bits (88), Expect = 8e-13
Identities = 60/69 (87%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || ||||| |||| ||||||||||||||||||
Sbjct 60991 GTACTCATTCCAATTACCAGACTCGAA-GAGCCTGGTATTGTTATTTATTGTCACTACCT 61049
Query 61 CCCCGTGTC 69
|||||||||
Sbjct 61050 CCCCGTGTC 61058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510369505024
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